RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 ZNF513Q8N8E2 541 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-206ENST00000543881 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 NT5C1AQ9BXI3 368 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 FBXO44Q9H4M3 255 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 PCDHB9Q9Y5E1 797 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 MYH10P35580 1976 aa12.51□□□□□ -0.41
GABPB1-206ENST00000543881 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 LAMA5O15230 3695 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 CYP26A1O43174 497 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 TLR5O60602 858 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 FTH1P19P0C7X4 201 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 IRF1P10914 325 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 PRCPP42785 496 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 GAD2Q05329 585 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 PPP1R26Q5T8A7 1209 aaPredicted RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 TRMT11Q7Z4G4 463 aaKnown RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 TMEM25Q86YD3 366 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 ETFBKMTQ8IXQ9 262 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 PNPLA1Q8N8W4 532 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 ADAMTS14Q8WXS8 1223 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 DUSP9Q99956 384 aaKnown RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 TLR8Q9NR97 1041 aaKnown RBP12.5□□□□□ -0.41
GABPB1-206ENST00000543881 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
GABPB1-206ENST00000543881 HOXB2P14652 356 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
GABPB1-206ENST00000543881 GTF2H1P32780 548 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 PMS1P54277 932 aaKnown RBP12.49□□□□□ -0.41
GABPB1-206ENST00000543881 PLEKHG6Q3KR16 790 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 BTBD8Q5XKL5 378 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 KRT39Q6A163 491 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 SCD5Q86SK9 330 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 TATDN2Q93075 761 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 ARID3AQ99856 593 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 CYLDQ9NQC7 956 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 NUDT5Q9UKK9 219 aa12.49□□□□□ -0.41
GABPB1-206ENST00000543881 A0A1W2PQF6 199 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 A0A1W2PQH9 124 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 MDM4O15151 490 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 TRIM24O15164 1050 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 ZBTB24O43167 697 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 HOXC11O43248 304 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 ZNF217O75362 1048 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 TULP3O75386 442 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 GJB3O75712 270 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 WASP42768 502 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 MXI1P50539 228 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 KIF11P52732 1056 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 PREPLQ4J6C6 727 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 C10orf76Q5T2E6 689 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 ZNF658Q5TYW1 1059 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 ANKRD40Q6AI12 368 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 SPATA20Q8TB22 786 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 MDM1Q8TC05 714 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 NACA2Q9H009 215 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 FAM124BQ9H5Z6 455 aaPredicted RBP12.48□□□□□ -0.41
GABPB1-206ENST00000543881 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CISHQ9NSE2 258 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 RAB20Q9NX57 234 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 DEC1Q9P2X7 70 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CYP8B1Q9UNU6 501 aa12.48□□□□□ -0.41
GABPB1-206ENST00000543881 CETN3O15182 167 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 EPB41P11171 864 aaKnown RBP12.47□□□□□ -0.41
GABPB1-206ENST00000543881 RARGP13631 454 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 NDUFV2P19404 249 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 NTSR1P30989 418 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms