RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TUBP50607 506 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 YWHAZP63104 245 aaKnown RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 TDRPQ86YL5 185 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 MFN1Q8IWA4 741 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 RFWD2Q8NHY2 731 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 TTC17Q96AE7 1141 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 TINF2Q9BSI4 451 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 APOL1O14791 398 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 WFS1O76024 890 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 RTN3O95197 1032 aaPredicted RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 YY1P25490 414 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 ROR2Q01974 943 aaKnown RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 DUSP28Q4G0W2 176 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 C9orf57Q5W0N0 161 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 CAND1Q86VP6 1230 aaKnown RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 UTP4Q969X6 686 aaKnown RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 FAM149B1Q96BN6 582 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 SPON1Q9HCB6 807 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 HESX1Q9UBX0 185 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 EFR3BQ9Y2G0 817 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 TIMM13Q9Y5L4 95 aaPredicted RBP15.32■□□□□ 0.04
DDX55-209ENST00000542286 ACTL7BQ9Y614 415 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
DDX55-209ENST00000542286 E7ESA3 106 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 PRPF4O43172 522 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX55-209ENST00000542286 CCNB1P14635 433 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 GOT1P17174 413 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 CCNA1P78396 465 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 PDK4Q16654 411 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 DGKDQ16760 1214 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 ADGRD1Q6QNK2 874 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 USP50Q70EL3 339 aaPredicted RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 PCGF5Q86SE9 256 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 LMNTD2Q8IXW0 634 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 SHCBP1Q8NEM2 672 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 TEKT4Q8WW24 435 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 TBCBQ99426 244 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 LGMNQ99538 433 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 PLCD4Q9BRC7 762 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 PIDD1Q9HB75 910 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 TEX264Q9Y6I9 313 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 E2F8A0AVK6 867 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 MAP3K13O43283 966 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 CALB2P22676 271 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 PHBP35232 272 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 IRX4P78413 519 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SEPT7Q16181 437 aaKnown RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SLC27A1Q6PCB7 646 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 RAB3IPQ96QF0 476 aaPredicted RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 KCTD15Q96SI1 283 aaPredicted RBP15.31■□□□□ 0.04
DDX55-209ENST00000542286 SYT15Q9BQS2 421 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SLC4A5Q9BY07 1137 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SLC13A1Q9BZW2 595 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 RNPEPL1Q9HAU8 725 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SLC24A2Q9UI40 661 aa15.31■□□□□ 0.04
DDX55-209ENST00000542286 SMIM28A0A1B0GU29 152 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 CCDC195A0A1B0GUA6 201 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 EDF1O60869 148 aaKnown RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 UNC5CO95185 931 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 MRPS35P82673 323 aaKnown RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX55-209ENST00000542286 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 MTMR10Q9NXD2 777 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 A0A0G2JND7 137 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 CYB561D2O14569 222 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 AMHP03971 560 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 BGNP21810 368 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 L1CAMP32004 1257 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 POU5F1BQ06416 359 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 KCNT2Q6UVM3 1135 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 DENND5BQ6ZUT9 1274 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 ZNF276Q8N554 614 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 BANPQ8N9N5 519 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 NRDE2Q9H7Z3 1164 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 MKI67P46013 3256 aaKnown RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 LPXNO60711 386 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 MT-ND3P03897 115 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 GNL1P36915 607 aaPredicted RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 ZBTB6Q15916 424 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 TMEM110Q86TL2 294 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 VSIG1Q86XK7 387 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 DHRS4Q9BTZ2 278 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 GCOM2Q9BZD3 368 aaPredicted RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 ZC3H7BQ9UGR2 993 aaKnown RBP15.3■□□□□ 0.04
DDX55-209ENST00000542286 AP4E1Q9UPM8 1137 aa15.3■□□□□ 0.04
DDX55-209ENST00000542286 TRIM49D1C9J1S8 452 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 ATP6V1C1P21283 382 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 SKIV2L2P42285 1042 aaKnown RBP15.29■□□□□ 0.04
DDX55-209ENST00000542286 ADIGQ0VDE8 80 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 TFDP2Q14188 446 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms