RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CIPCQ9C0C6 399 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 GZF1Q9H116 711 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 OSBPL2Q9H1P3 480 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 ZHX3Q9H4I2 956 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 THSD1Q9NS62 852 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 STARD5Q9NSY2 213 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 MAN2B2Q9Y2E5 1009 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 CLDN5O00501 218 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 GABRDO14764 452 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 SDC3O75056 442 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 CSO75390 466 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 TBX18O95935 607 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 PIGRP01833 764 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ERVPABLB-1P60509 514 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 RACK1P63244 317 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 DAB2P98082 770 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ILKQ13418 452 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 DHX8Q14562 1220 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 IGFBP7Q16270 282 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 C3orf38Q5JPI3 329 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 TTC38Q5R3I4 469 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 SERPINA13PQ6UXR4 307 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 LSMEM2Q8N112 164 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 MYCT1Q8N699 235 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 TOP6BLQ8N6T0 577 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 GANCQ8TET4 914 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ORAI3Q9BRQ5 295 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 POLR1BQ9H9Y6 1135 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ASCL3Q9NQ33 180 aa11.68□□□□□ -0.54
CTNNA1-234ENST00000522227 ANKRD17O75179 2603 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 WNT9AO14904 365 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 PFKFB2O60825 505 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 LSSP48449 732 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 ARRB1P49407 418 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 E2F1Q01094 437 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 ARID5AQ03989 594 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 SERINC3Q13530 473 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 SGO2Q562F6 1265 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 KIAA0895LQ68EN5 471 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 HTR3DQ70Z44 454 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 CACTIN-AS1Q8N1I8 211 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 PDZD8Q8NEN9 1154 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 OR2T3Q8NH03 318 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 KBTBD7Q8WVZ9 684 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 SKA1Q96BD8 255 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 C8orf48Q96LL4 319 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 GDF3Q9NR23 364 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 GDAP2Q9NXN4 497 aa11.67□□□□□ -0.54
CTNNA1-234ENST00000522227 MDM4O15151 490 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 SIGLEC6O43699 453 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 JAK2O60674 1132 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 IL18RAPO95256 599 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 IGHV4-34P06331 123 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 CENPBP07199 599 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 ITGB6P18564 788 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 RBMS1P29558 406 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 PGFP49763 221 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 ZNF132P52740 706 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 MFAP3P55082 362 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 FNDC3BQ53EP0 1204 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 PTRH1Q86Y79 214 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 NUP93Q8N1F7 819 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 ZSWIM2Q8NEG5 633 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 MYCBPAPQ8TBZ2 947 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 POMGNT1Q8WZA1 660 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 DEPDC7Q96QD5 511 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 FAM213AQ9BRX8 229 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 EBF2Q9HAK2 575 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 LRRC4CQ9HCJ2 640 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 ELOVL2Q9NXB9 296 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 MARK1Q9P0L2 795 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 SATB2Q9UPW6 733 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 MYH10P35580 1976 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 FLNCQ14315 2725 aa11.66□□□□□ -0.54
CTNNA1-234ENST00000522227 A0A1W2PPC4 97 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 PMS2P1A4D2B8 440 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 TRIM38O00635 465 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 OPA1O60313 960 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 GREM1O60565 184 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 TLR5O60602 858 aa11.65□□□□□ -0.54
CTNNA1-234ENST00000522227 FAM13AO94988 1023 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms