RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 EXD1Q8NHP7 514 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 PCED1BQ96HM7 432 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 FAM193BQ96PV7 902 aaPredicted RBP8.02□□□□□ -1.13
CDC42-205ENST00000498236 LPIN3Q9BQK8 851 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 COLEC11Q9BWP8 271 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 OXCT2Q9BYC2 517 aaPredicted RBP8.02□□□□□ -1.13
CDC42-205ENST00000498236 SLITRK6Q9H5Y7 841 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 NRDE2Q9H7Z3 1164 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 ANKZF1Q9H8Y5 726 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 PNPLA8Q9NP80 782 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 ST7Q9NRC1 585 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 RBM12Q9NTZ6 932 aaKnown RBP8.02□□□□□ -1.13
CDC42-205ENST00000498236 ASNSD1Q9NWL6 643 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
CDC42-205ENST00000498236 FAM8A1Q9UBU6 413 aa8.02□□□□□ -1.13
CDC42-205ENST00000498236 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDC42-205ENST00000498236 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
CDC42-205ENST00000498236 GOLGA6L10A0A0M3HER8 536 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 A0A1W2PP55 124 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 F8VP50 259 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 GOLGA8SH3BPF8 625 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 KRIT1O00522 736 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 NRP1O14786 923 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 FSCN2O14926 492 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 SART1O43290 800 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 LRCH4O75427 683 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 TADA2AO75478 443 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 DGKIO75912 1065 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ZRANB2O95218 330 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDC42-205ENST00000498236 GJB6O95452 261 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ALDH2P05091 517 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 KRT7P08729 469 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 BMP4P12644 408 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 GPD1P21695 349 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ACAT1P24752 427 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 PTPN9P43378 593 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 OR1G1P47890 313 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 RGS7P49802 495 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 TAS2R40P59535 323 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 TSPY1Q01534 308 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 SLC25A11Q02978 314 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 YWHAHQ04917 246 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 C2orf54Q08AI8 447 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ELAVL2Q12926 359 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 GRM2Q14416 872 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 BRD3Q15059 726 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 CYP1B1Q16678 543 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 RAB41Q5JT25 222 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 EFHC1Q5JVL4 640 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 OR6B2Q6IFH4 312 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 MFSD5Q6N075 450 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 CC2D1AQ6P1N0 951 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 NXPE4Q6UWF7 544 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 FAM35AQ86V20 835 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 PIGZQ86VD9 579 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 SLC13A5Q86YT5 568 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 RCOR2Q8IZ40 523 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 OR10T2Q8NGX3 314 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 JOSD2Q8TAC2 188 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 HNRNPLLQ8WVV9 542 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 MAIP1Q8WWC4 291 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 CENPIQ92674 756 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 SMARCD1Q96GM5 515 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 RBM41Q96IZ5 413 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 SMOQ99835 787 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 C11orf84Q9BUA3 381 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 PARD6BQ9BYG5 372 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ZCWPW1Q9H0M4 648 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 METTL5Q9NRN9 209 aaKnown RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 KRT82Q9NSB4 513 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDC42-205ENST00000498236 SMARCAL1Q9NZC9 954 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 EHD2Q9NZN4 543 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 DNAJB4Q9UDY4 337 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 ADAM28Q9UKQ2 775 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 EFR3BQ9Y2G0 817 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 TIMM13Q9Y5L4 95 aaPredicted RBP8.01□□□□□ -1.13
CDC42-205ENST00000498236 LTBP2Q14767 1821 aa8.01□□□□□ -1.13
CDC42-205ENST00000498236 SF3B1O75533 1304 aaKnown RBP eCLIP8.01□□□□□ -1.131e-7■■■■■ 113.4
CDC42-205ENST00000498236 TET1Q8NFU7 2136 aa8□□□□□ -1.13
CDC42-205ENST00000498236 SCN5AQ14524 2016 aa8□□□□□ -1.13
CDC42-205ENST00000498236 MICAL3Q7RTP6 2002 aa8□□□□□ -1.13
CDC42-205ENST00000498236 TRIM43BA6NCK2 446 aa8□□□□□ -1.13
CDC42-205ENST00000498236 OR6C75A6NL08 312 aa8□□□□□ -1.13
CDC42-205ENST00000498236 TBKBP1A7MCY6 615 aa8□□□□□ -1.13
CDC42-205ENST00000498236 HHLA1C9JL84 531 aa8□□□□□ -1.13
CDC42-205ENST00000498236 F8W810 466 aa8□□□□□ -1.13
CDC42-205ENST00000498236 I3L4J1 428 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CLDN5O00501 218 aa8□□□□□ -1.13
CDC42-205ENST00000498236 HSF2BPO75031 334 aa8□□□□□ -1.13
CDC42-205ENST00000498236 RNF8O76064 485 aa8□□□□□ -1.13
CDC42-205ENST00000498236 BAIAP3O94812 1187 aa8□□□□□ -1.13
CDC42-205ENST00000498236 EFEMP2O95967 443 aa8□□□□□ -1.13
CDC42-205ENST00000498236 GALTP07902 379 aa8□□□□□ -1.13
CDC42-205ENST00000498236 PDGFRAP16234 1089 aa8□□□□□ -1.13
CDC42-205ENST00000498236 DESP17661 470 aa8□□□□□ -1.13
CDC42-205ENST00000498236 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms