RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SERTAD4Q9NUC0 356 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 DERAQ9Y315 318 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 UBE2J1Q9Y385 318 aaPredicted RBP6.17□□□□□ -1.42
SSR3-208ENST00000496050 MAST3O60307 1309 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 SEPT4O43236 478 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 ORC4O43929 436 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 TTLL1O95922 423 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 MYCLP12524 364 aaPredicted RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 NDUFB7P17568 137 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 CYP2C18P33260 490 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 AVPR1BP47901 424 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 E2F1Q01094 437 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 UBE3AQ05086 875 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 DDX10Q13206 875 aaKnown RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 SLC12A1Q13621 1099 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 CYP1B1Q16678 543 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 TXNRD1Q16881 649 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 MIIPQ5JXC2 388 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 GRHL2Q6ISB3 625 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 Q6ZWC4 215 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 SYT13Q7L8C5 426 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSR3-208ENST00000496050 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 ABHD11Q8NFV4 315 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 SH3RF3Q8TEJ3 882 aaPredicted RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 HERVK_113Q902F9 699 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 MCRS1Q96EZ8 462 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 WDYHV1Q96HA8 205 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 CINPQ9BW66 212 aaPredicted RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 WASH6PQ9NQA3 447 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 SNX15Q9NRS6 342 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 RASSF1Q9NS23 344 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 IFT80Q9P2H3 777 aaPredicted RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 KCND3Q9UK17 655 aa6.16□□□□□ -1.42
SSR3-208ENST00000496050 RRP7AQ9Y3A4 280 aaKnown RBP6.16□□□□□ -1.42
SSR3-208ENST00000496050 LOC105369274A0A096LPK9 316 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 LOC102723532A0A0G2JNH3 316 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 GXYLT2A0PJZ3 443 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 TJP3O95049 919 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 VAMP2P63027 116 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 RBM6P78332 1123 aaKnown RBP6.15□□□□□ -1.42
SSR3-208ENST00000496050 G3BP1Q13283 466 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSR3-208ENST00000496050 TRPC3Q13507 836 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 DNASE1L3Q13609 305 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 ANKRD1Q15327 319 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
SSR3-208ENST00000496050 AAK1Q2M2I8 961 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 GALNTL6Q49A17 601 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 TMEM63BQ5T3F8 832 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 ANKRD40Q6AI12 368 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 ANKRD16Q6P6B7 361 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 DPY19L3Q6ZPD9 716 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 OR4N4Q8N0Y3 316 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 ESX1Q8N693 406 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 PNPLA1Q8N8W4 532 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 CEP70Q8NHQ1 597 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 SEC62Q99442 399 aaKnown RBP6.15□□□□□ -1.42
SSR3-208ENST00000496050 MECRQ9BV79 373 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 MLST8Q9BVC4 326 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 ZHX3Q9H4I2 956 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 GGA3Q9NZ52 723 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 LRIT1Q9P2V4 623 aa6.15□□□□□ -1.42
SSR3-208ENST00000496050 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3BA6NDS4 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 C1QTNF3-AMACRE9PGA6 284 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 EYA2O00167 538 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 QSOX1O00391 747 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 JUPP14923 745 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 MAKP20794 623 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 MCM5P33992 734 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 THBS4P35443 961 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 GRIA3P42263 894 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 MRPS35P82673 323 aaKnown RBP6.14□□□□□ -1.43
SSR3-208ENST00000496050 TXNL4AP83876 142 aaKnown RBP6.14□□□□□ -1.43
SSR3-208ENST00000496050 DEUP1Q05D60 604 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 MPP3Q13368 585 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 CTXN3Q4LDR2 81 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3GQ6DHY5 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 DGAT2L7PQ6IED9 249 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3CQ6IPX1 549 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 ACSM6Q6P461 480 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 RASGRP2Q7LDG7 609 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 CPOQ8IVL8 374 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 TBC1D3Q8IZP1 549 aaPredicted RBP6.14□□□□□ -1.43
SSR3-208ENST00000496050 USP38Q8NB14 1042 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 CAVIN3Q969G5 261 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 UNC45AQ9H3U1 944 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 KCNK9Q9NPC2 374 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 DUSP22Q9NRW4 184 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms