RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PDCD11Q14690 1871 aaKnown RBP15.34■□□□□ 0.05
CHTOP-206ENST00000495554 CHUKO15111 745 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 FAM163BP0C2L3 166 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 CCDC130P13994 396 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 L1CAMP32004 1257 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 NR2C2P49116 596 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 LIMS2Q7Z4I7 341 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 HSFY1Q96LI6 401 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 PNPLA8Q9NP80 782 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 SLCO1B3Q9NPD5 702 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 IPPQ9Y573 584 aa15.33■□□□□ 0.05
CHTOP-206ENST00000495554 TNPO2O14787 897 aaKnown RBP15.33■□□□□ 0.04
CHTOP-206ENST00000495554 AVILO75366 819 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 CAPN15O75808 1086 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 MT-ND3P03897 115 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 INHBAP08476 426 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
CHTOP-206ENST00000495554 PTK7Q13308 1070 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 CRHR2Q13324 411 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 SYCP2LQ5T4T6 812 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 TBC1D1Q86TI0 1168 aaPredicted RBP15.33■□□□□ 0.04
CHTOP-206ENST00000495554 APPL2Q8NEU8 664 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 TCP10LQ8TDR4 215 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 CLEC4CQ8WTT0 213 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 ZNF75CPQ92670 426 aaPredicted RBP15.33■□□□□ 0.04
CHTOP-206ENST00000495554 KATNAL1Q9BW62 490 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 ETNK2Q9NVF9 386 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 USH1CQ9Y6N9 552 aa15.33■□□□□ 0.04
CHTOP-206ENST00000495554 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 APRTP07741 180 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 SLC10A3P09131 477 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 LCP1P13796 627 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 TAF6P49848 677 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 YWHAZP63104 245 aaKnown RBP15.32■□□□□ 0.04
CHTOP-206ENST00000495554 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 SOCS4Q8WXH5 440 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 VPS11Q9H270 941 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 DHX35Q9H5Z1 703 aaKnown RBP15.32■□□□□ 0.04
CHTOP-206ENST00000495554 GTF2IRD1Q9UHL9 959 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 AP4E1Q9UPM8 1137 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 FAM155AB1AL88 458 aaPredicted RBP15.32■□□□□ 0.04
CHTOP-206ENST00000495554 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 IGFBP6P24592 240 aaPredicted RBP15.32■□□□□ 0.04
CHTOP-206ENST00000495554 ADRA1DP25100 572 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 ALDH3A1P30838 453 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 SKIV2L2P42285 1042 aaKnown RBP15.32■□□□□ 0.04
CHTOP-206ENST00000495554 MCUQ8NE86 351 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 LRRC39Q96DD0 335 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 ZIC5Q96T25 663 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 ETNK1Q9HBU6 452 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
CHTOP-206ENST00000495554 DUSP11O75319 330 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 GCATO75600 419 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 AKR1A1P14550 325 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CD151P48509 253 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 SV2CQ496J9 727 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 SLC45A4Q5BKX6 768 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 STRADAQ7RTN6 431 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 AGGF1Q8N302 714 aaeCLIP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CCDC110Q8TBZ0 833 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 MAGEC3Q8TD91 643 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 SLC2A14Q8TDB8 520 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 KLHL29Q96CT2 875 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 ZC3H7BQ9UGR2 993 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 GOLGA8RI6L899 631 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 TRDMT1O14717 391 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CAND1Q86VP6 1230 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 SLC26A11Q86WA9 606 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 KLHL23Q8NBE8 558 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 PTGESO14684 152 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 LPXNO60711 386 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 HUS1O60921 280 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 GNAT1P11488 350 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 ALADP13716 330 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CCNB1P14635 433 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 ATXN1P54253 815 aaKnown RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 GBE1Q04446 702 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 RIPK1Q13546 671 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 FAXCQ5TGI0 409 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 LRRC6Q86X45 466 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 ZNF276Q8N554 614 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 WNT8BQ93098 351 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CFAP36Q96G28 342 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 CSPG4P5Q96PW8 444 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 LRRC37BQ96QE4 947 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 KLF6Q99612 283 aaPredicted RBP15.31■□□□□ 0.04
CHTOP-206ENST00000495554 POPDC2Q9HBU9 364 aa15.31■□□□□ 0.04
CHTOP-206ENST00000495554 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
CHTOP-206ENST00000495554 XPO1O14980 1071 aaKnown RBP15.3■□□□□ 0.04
CHTOP-206ENST00000495554 DCTN3O75935 186 aa15.3■□□□□ 0.04
CHTOP-206ENST00000495554 GSTA2P09210 222 aa15.3■□□□□ 0.04
CHTOP-206ENST00000495554 MATKP42679 507 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms