RNA–Protein interactions for RNA: ENST00000494966.1

NIPSNAP1-205, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-205ENST00000494966 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SRRTQ9BXP5 876 aaKnown RBP13.11□□□□□ -0.31
NIPSNAP1-205ENST00000494966 PLK2Q9NYY3 685 aa13.11□□□□□ -0.31
NIPSNAP1-205ENST00000494966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.11□□□□□ -0.31
NIPSNAP1-205ENST00000494966 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 M0QYV0 167 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 GDF9O60383 454 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 FGFR1OPO95684 399 aaKnown RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 KLKB1P03952 638 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 ZNF806P0C7X5 589 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 GCNT1Q02742 428 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CREB5Q02930 508 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 STILQ15468 1287 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CAMK4Q16566 473 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 LCLAT1Q6UWP7 414 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 LMO3Q8TAP4 145 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 TFAP2BQ92481 460 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 NDRG1Q92597 394 aaKnown RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 KAT5Q92993 513 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 VPS45Q9NRW7 570 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 AGO1Q9UL18 857 aaKnown RBP13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
NIPSNAP1-205ENST00000494966 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SLC30A4O14863 429 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 MAP3K13O43283 966 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CYBBP04839 570 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 LCP1P13796 627 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 HOXB2P14652 356 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 NTSR1P30989 418 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 RGS7P49802 495 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 MARSP56192 900 aaKnown RBP13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 PLA2G2CQ5R387 149 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 PMS2CLQ68D20 193 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 TOGARAM2Q6ZUX3 1019 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 EDEM1Q92611 657 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 SMOC1Q9H4F8 434 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
NIPSNAP1-205ENST00000494966 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 E7ENQ6 273 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 PENKP01210 267 aaPredicted RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 KRT5P13647 590 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 BCKDHBP21953 392 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 BRD2P25440 801 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 P2RY2P41231 377 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 WASP42768 502 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CNGA2Q16280 664 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 PKDCCQ504Y2 493 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 FYB2Q5VWT5 728 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 PMF1Q6P1K2 205 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CREBRFQ8IUR6 639 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 FMNL3Q8IVF7 1028 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 SLC35F5Q8WV83 523 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 RWDD2AQ9UIY3 292 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 HCN2Q9UL51 889 aa13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 MYO18AQ92614 2054 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP1-205ENST00000494966 PIK3R2O00459 728 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CAVIN2O95810 425 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CALCAP01258 141 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CISD3P0C7P0 127 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 ZNF132P52740 706 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 DAOAP59103 153 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 TRIP4Q15650 581 aaPredicted RBP13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
NIPSNAP1-205ENST00000494966 CYP2U1Q7Z449 544 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 639 ms