RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 HINFPQ9BQA5 517 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 NAT10Q9H0A0 1025 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 SEMA4AQ9H3S1 761 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 DEC1Q9P2X7 70 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 AGO1Q9UL18 857 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 ANTXRLA6NF34 631 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 E5RJQ4 531 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 K7ESF4 209 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 CAPN9O14815 690 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 UCHL3P15374 230 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 CLCN1P35523 988 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 TIE1P35590 1138 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 CHKAP35790 457 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PXNP49023 591 aaPredicted RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 KLK7P49862 253 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PDCLQ13371 301 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 MEA1Q16626 185 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PREPLQ4J6C6 727 aaPredicted RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 ETFBKMTQ8IXQ9 262 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 ZBTB44Q8NCP5 570 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 STK32AQ8WU08 396 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 ACDQ96AP0 544 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PCMTD1Q96MG8 357 aaPredicted RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
PPP1R3F-204ENST00000471261 FAM170AA1A519 330 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 TRIM24O15164 1050 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 BPIFB4P59827 614 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 DMC1Q14565 340 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 NUDT18Q6ZVK8 323 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 SYT13Q7L8C5 426 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 LONP2Q86WA8 852 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 C1orf131Q8NDD1 294 aaKnown RBP13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 NELL1Q92832 810 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 PPP1R13BQ96KQ4 1090 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 NOX5Q96PH1 765 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 STK33Q9BYT3 514 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 SYNCQ9H7C4 482 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 ZDHHC4Q9NPG8 344 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 PCDHGC3Q9UN70 934 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
PPP1R3F-204ENST00000471261 F8VZ95 297 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 CACNG3O60359 315 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 CYBBP04839 570 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 CYP11B1P15538 503 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 TNFRSF4P43489 277 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 RPL34P49207 117 aaKnown RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 DGKGP49619 791 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 POLR2FP61218 127 aaKnown RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 UBXN1Q04323 297 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 LPAL2Q16609 132 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 EMC10Q5UCC4 262 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 PRR23BQ6ZRT6 265 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 TRIM62Q9BVG3 475 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 LHX5Q9H2C1 402 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 LIMA1Q9UHB6 759 aaKnown RBP13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
PPP1R3F-204ENST00000471261 SYCE3A1L190 88 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 LGALS16A8MUM7 142 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 TSPAN3O60637 253 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 LILRB5O75023 590 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 GFPT2O94808 682 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 FYNP06241 537 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
PPP1R3F-204ENST00000471261 TBX4P57082 545 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms