RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RMND1Q9NWS8 449 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 EVLQ9UI08 416 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 PILRBQ9UKJ0 227 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 AGO1Q9UL18 857 aaKnown RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 CYP8B1Q9UNU6 501 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF510Q9Y2H8 683 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 IGHV1OR15-9A0A0B4J2B8 117 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 TULP2O00295 520 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ZBED1O96006 694 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
CPSF4-210ENST00000469897 CFIP05156 583 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ENGP17813 658 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 NDUFV2P19404 249 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 CORO1AP31146 461 aaKnown RBP13.93□□□□□ -0.18
CPSF4-210ENST00000469897 SLC8A3P57103 927 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF33AQ06730 810 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 PDE4CQ08493 712 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 LMAN2Q12907 356 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 GEN1Q17RS7 908 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 FYB2Q5VWT5 728 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 SLC23A3Q6PIS1 610 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 SLC36A4Q6YBV0 504 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 UBA3Q8TBC4 463 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 TSG101Q99816 390 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 DCLK3Q9C098 648 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 MARCH2Q9P0N8 246 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 CLEC4EQ9ULY5 219 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 COQ4Q9Y3A0 265 aa13.93□□□□□ -0.18
CPSF4-210ENST00000469897 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 GFRA2O00451 464 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF217O75362 1048 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 SMC2O95347 1197 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
CPSF4-210ENST00000469897 MFAP3P55082 362 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 SHC2P98077 582 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 CUL2Q13617 745 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 PM20D1Q6GTS8 502 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 DEFB124Q8NES8 71 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 MRGPRX1Q96LB2 322 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 CD93Q9NPY3 652 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 TSPAN16Q9UKR8 245 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 STRIP2Q9ULQ0 834 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 SLC6A14Q9UN76 642 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 SLC27A6Q9Y2P4 619 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 STON1Q9Y6Q2 735 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 GREB1Q4ZG55 1949 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
CPSF4-210ENST00000469897 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
CPSF4-210ENST00000469897 TSPAN3O60637 253 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 CEACAM1P13688 526 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 CD19P15391 556 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 COBLL1Q53SF7 1204 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SGO2Q562F6 1265 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SLC41A1Q8IVJ1 513 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 ZC3H3Q8IXZ2 948 aaKnown RBP13.91□□□□□ -0.18
CPSF4-210ENST00000469897 TRIML1Q8N9V2 468 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 CEP76Q8TAP6 659 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 DDI1Q8WTU0 396 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 EDEM1Q92611 657 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SMARCE1Q969G3 411 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 GTPBP2Q9BX10 602 aaKnown RBP13.91□□□□□ -0.18
CPSF4-210ENST00000469897 LRRC4Q9HBW1 653 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 HESX1Q9UBX0 185 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 ARMCX3Q9UH62 379 aaPredicted RBP13.91□□□□□ -0.18
CPSF4-210ENST00000469897 SFMBT1Q9UHJ3 866 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 GTF3C3Q9Y5Q9 886 aa13.91□□□□□ -0.18
CPSF4-210ENST00000469897 YJEFN3A6XGL0 299 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 E7ENQ6 273 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 NDUFS2O75306 463 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 TOP3BO95985 862 aaKnown RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 CYBBP04839 570 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 SERPINF2P08697 491 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 SPINK2P20155 84 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 DPP6P42658 865 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 IL12RB1P42701 662 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 GFPT1Q06210 699 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF252P-AS1Q0IIN9 211 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 FOXC1Q12948 553 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 FUT11Q495W5 492 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 KIAA1324Q6UXG2 1013 aaKnown RBP13.9□□□□□ -0.18
CPSF4-210ENST00000469897 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 RGL4Q8IZJ4 473 aa13.9□□□□□ -0.18
CPSF4-210ENST00000469897 RNF139Q8WU17 664 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms