RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 ISCUQ9H1K1 167 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 HAUS4Q9H6D7 363 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 LUC7LQ9NQ29 371 aaKnown RBP5.83□□□□□ -1.48
VPS41-211ENST00000466017 FAM86C1Q9NVL1 165 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 MYO1AQ9UBC5 1043 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 DUSP13Q9UII6 198 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 AJAP1Q9UKB5 411 aaPredicted RBP5.83□□□□□ -1.48
VPS41-211ENST00000466017 PYCARDQ9ULZ3 195 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 BARX2Q9UMQ3 279 aaPredicted RBP5.83□□□□□ -1.48
VPS41-211ENST00000466017 AGAP1Q9UPQ3 857 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 EFR3BQ9Y2G0 817 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.83□□□□□ -1.48
VPS41-211ENST00000466017 HES2Q9Y543 173 aa5.83□□□□□ -1.48
VPS41-211ENST00000466017 UMODL1Q5DID0 1318 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 PDCD11Q14690 1871 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 A0A0A6YYK5 440 aaPredicted RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 KPNA7A9QM74 516 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 DDX3XO00571 662 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS41-211ENST00000466017 GABRDO14764 452 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 SHOXO15266 292 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 AKR1B10O60218 316 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 BAIAP3O94812 1187 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 IPO7O95373 1038 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 CYP1A1P04798 512 aaPredicted RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 VDRP11473 427 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 UNGP13051 313 aaPredicted RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 CYP11B1P15538 503 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 WARSP23381 471 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 CDH5P33151 784 aaPredicted RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 MAGEA1P43355 309 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 KIF11P52732 1056 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 VAV2P52735 878 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 HADHBP55084 474 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 LILRA4P59901 499 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TNNC1P63316 161 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 CDR2Q01850 454 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 APBA1Q02410 837 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 EGR3Q06889 387 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TUSC3Q13454 348 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 SPA17Q15506 151 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 CNGA2Q16280 664 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 UPP1Q16831 310 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 WDR72Q3MJ13 1102 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 FBXW10Q5XX13 1052 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 SPOPLQ6IQ16 392 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 ALKBH5Q6P6C2 394 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 GLB1LQ6UWU2 654 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 CD300LGQ6UXG3 332 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TMEM86AQ8N2M4 240 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 RNF10Q8N5U6 811 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 OLIG1Q8TAK6 271 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 KAT5Q92993 513 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TOP1MTQ969P6 601 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TMEM176AQ96HP8 235 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 COX4I2Q96KJ9 171 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 SLC6A18Q96N87 628 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 ALPK1Q96QP1 1244 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 ASPNQ9BXN1 380 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 HDAC8Q9BY41 377 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 TSGA10Q9BZW7 698 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 CXCL16Q9H2A7 254 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 LHX5Q9H2C1 402 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 CISHQ9NSE2 258 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 NOCTQ9UK39 431 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 DSEQ9UL01 958 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 PPP2R2CQ9Y2T4 447 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
VPS41-211ENST00000466017 PCDHB7Q9Y5E2 793 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 PCDHB4Q9Y5E5 795 aa5.82□□□□□ -1.48
VPS41-211ENST00000466017 KIAA0100Q14667 2235 aaKnown RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 A0A087X0T9 212 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ANKRD62A6NC57 917 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 TRIM43BA6NCK2 446 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 NOTOA8MTQ0 251 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 M0QZQ0 153 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZNF263O14978 683 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 PAX4O43316 350 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 MED7O43513 233 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 KRT86O43790 486 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 RTN2O75298 545 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 DGKIO75912 1065 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ALDH2P05091 517 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 PLEKP08567 350 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 KRT19P08727 400 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 H2AFZP0C0S5 128 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 ZGLP1P0C6A0 271 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 FAM228BP0C875 321 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 JUNBP17275 347 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 CHRNB2P17787 502 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 EN2P19622 333 aaPredicted RBP5.81□□□□□ -1.48
VPS41-211ENST00000466017 TYMPP19971 482 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 CYP2C18P33260 490 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 MLH1P40692 756 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 LHX1P48742 406 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 PDE6CP51160 858 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 RAD23BP54727 409 aa5.81□□□□□ -1.48
VPS41-211ENST00000466017 CCL23P55773 120 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms