RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 FHL3Q13643 280 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 ABLIM2Q6H8Q1 611 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 MRNIPQ6NTE8 343 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 TLDC1Q6P9B6 456 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 ANKRD13BQ86YJ7 626 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 WACQ9BTA9 647 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 TRMOQ9BU70 441 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 NUAK2Q9H093 628 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 TBC1D23Q9NUY8 699 aa4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 SIRT4Q9Y6E7 314 aaPredicted RBP4.15□□□□□ -1.75
TM9SF3-203ENST00000464654 A0A087WZ62 844 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 FAM90A10PA6NDY2 464 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 TRIM38O00635 465 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 INPPL1O15357 1258 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 CA12O43570 354 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 CCNT2O60583 730 aaKnown RBP4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 MYL4P12829 197 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 MATN1P21941 496 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 ATICP31939 592 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 GALNSP34059 522 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 ZNF543Q08ER8 600 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 FAXCQ5TGI0 409 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 ZNF517Q6ZMY9 492 aaPredicted RBP4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 BEND5Q7L4P6 421 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 IRF2BP2Q7Z5L9 587 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 P3H2Q8IVL5 708 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 IGFBPL1Q8WX77 278 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 OVCA2Q8WZ82 227 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 EIF2AQ9BY44 585 aaKnown RBP4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 KRTAP1-5Q9BYS1 174 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 MAGEB5Q9BZ81 275 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 TMEM184CQ9NVA4 438 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 MYO1AQ9UBC5 1043 aa4.14□□□□□ -1.75
TM9SF3-203ENST00000464654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 A0A1W2PPC4 97 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 OR2W5A6NFC9 320 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 ADAM10O14672 748 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 IKBKBO14920 756 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 COQ9O75208 318 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 OAZ2O95190 189 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 PLAUP00749 431 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 ARP10275 920 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 TSHRP16473 764 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 FGFR2P21802 821 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 MMP8P22894 467 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 MST1P26927 711 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 PIK3CBP42338 1070 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 ME1P48163 572 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 CASP5P51878 434 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 YPEL5P62699 121 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 GPS1Q13098 491 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 STIM1Q13586 685 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 TRIM71Q2Q1W2 868 aaKnown RBP4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 ZNF260Q3ZCT1 412 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 EARS2Q5JPH6 523 aaKnown RBP4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 FAM90A2PQ658T7 463 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 BHLHA9Q7RTU4 235 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 FMNL3Q8IVF7 1028 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 CLASRPQ8N2M8 674 aaKnown RBP4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 RNF152Q8N8N0 203 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 NSMCE1Q8WV22 266 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 TIFAQ96CG3 184 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 APOL5Q9BWW9 433 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 TMEM8AQ9HCN3 771 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 POT1Q9NUX5 634 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 KLHL42Q9P2K6 505 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 CORO2BQ9UQ03 480 aa4.13□□□□□ -1.75
TM9SF3-203ENST00000464654 TTC34A8MYJ7 566 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 RRHO14718 337 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 PQBP1O60828 265 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 IDEP14735 1019 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 HOXD12P35452 270 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SLC12A2P55011 1212 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 RAE1P78406 368 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 B4GALNT1Q00973 533 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 RAPGEF1Q13905 1077 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 HLTFQ14527 1009 aaKnown RBP eCLIP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 KPNB1Q14974 876 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 CNGA3Q16281 694 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SLC5A9Q2M3M2 681 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 KIAA0408Q6ZU52 694 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 WDR75Q8IWA0 830 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 CCDC150Q8NCX0 1101 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 FCRL5Q96RD9 977 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 NUDT22Q9BRQ3 303 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 GATA5Q9BWX5 397 aaPredicted RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 TM2D2Q9BX73 214 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SAP30LQ9HAJ7 183 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 AGO4Q9HCK5 861 aaKnown RBP4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 ABHD10Q9NUJ1 306 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 HS3ST3B1Q9Y662 390 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SPATA31A5Q5VU36 1347 aa4.12□□□□□ -1.75
TM9SF3-203ENST00000464654 SPATA31A7Q8IWB4 1347 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms