RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 KIAA1549LQ6ZVL6 1849 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 M0QYT0 321 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 STK25O00506 426 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 NCAM2O15394 837 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 GRAP2O75791 330 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 RNF8O76064 485 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 LATS1O95835 1130 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TRUB2O95900 331 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ADH1CP00326 375 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 FTLP02792 175 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 HMBSP08397 361 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 GLULP15104 373 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ABCB4P21439 1286 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 FCARP24071 287 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CCR1P32246 355 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 EIF4A3P38919 411 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MATKP42679 507 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SULT1E1P49888 294 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TBX4P57082 545 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 PRKCQQ04759 706 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 DEUP1Q05D60 604 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 RING1Q06587 406 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SIGLEC14Q08ET2 396 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TBX2Q13207 712 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MAPK8IP2Q13387 824 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 RUNX3Q13761 415 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TRIP4Q15650 581 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF77Q15935 545 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SLC18A3Q16572 532 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ITPRIPL2Q3MIP1 535 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 C10orf76Q5T2E6 689 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ACBD5Q5T8D3 534 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ALKBH5Q6P6C2 394 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MON1BQ7L1V2 547 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC170Q8IYT3 715 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 DEFB106AQ8N104 65 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ATP6V0D2Q8N8Y2 350 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF557Q8N988 423 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SPC24Q8NBT2 197 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC112Q8NEF3 446 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC26Q8TAB7 109 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 DQX1Q8TE96 717 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 RSAD2Q8WXG1 361 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CTNNBL1Q8WYA6 563 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 NDRG1Q92597 394 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 PCDHB18PQ96TA0 734 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 KLF16Q9BXK1 252 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 C8orf33Q9H7E9 229 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 NHEJ1Q9H9Q4 299 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TRPV5Q9NQA5 729 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SLC2A4RGQ9NR83 387 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 GKN1Q9NS71 199 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 DDIT4Q9NX09 232 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 ARHGAP20Q9P2F6 1191 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 MYO1AQ9UBC5 1043 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 WNT16Q9UBV4 365 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CNOT8Q9UFF9 292 aaKnown RBP6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SFMBT1Q9UHJ3 866 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CYTH4Q9UIA0 394 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 NAALADL1Q9UQQ1 740 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 CCL26Q9Y258 94 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 TLR6Q9Y2C9 796 aa6.65□□□□□ -1.34
SF3B1-206ENST00000462613 SYNJ2BP-COX16A0A087WUM0 186 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 A0A087X0T9 212 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 SIGLEC16A6NMB1 481 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 DDX3XO00571 662 aaKnown RBP eCLIP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 MDM4O15151 490 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 IRAK2O43187 625 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 AP5Z1O43299 807 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 STC2O76061 302 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 TBX18O95935 607 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 PTMAP06454 111 aaKnown RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 PLEKP08567 350 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 H2AFZP0C0S5 128 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 FAM228BP0C875 321 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 PDGFRAP16234 1089 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 GPD1P21695 349 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 CORO1AP31146 461 aaKnown RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 MLLT6P55198 1093 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 GPC5P78333 572 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 ZXDAP98168 799 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 GAD2Q05329 585 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 GFPT1Q06210 699 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 NME3Q13232 169 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 E2F5Q15329 346 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 MLF2Q15773 248 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 CDO1Q16878 200 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 ANO4Q32M45 955 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 SLC25A52Q3SY17 297 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 C2CD6Q53TS8 623 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 BRMS1LQ5PSV4 323 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 E4F1Q66K89 784 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 HGSNATQ68CP4 663 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 HFE2Q6ZVN8 426 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms