RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SOX13Q9UN79 622 aa12.15□□□□□ -0.46
PDZRN3-203ENST00000462146 OGTO15294 1046 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CDK7P50613 346 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CRADDP78560 199 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 KRT81Q14533 505 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 DHDDSQ86SQ9 333 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 RASSF3Q86WH2 238 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 TRIM42Q8IWZ5 723 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 FAM172AQ8WUF8 416 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 SIX4Q9UIU6 781 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 EVPLQ92817 2033 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PTPRFP10586 1907 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 STK10O94804 968 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 F7P08709 466 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CXCL8P10145 99 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CD1EP15812 388 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 ASPHQ12797 758 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 DLG1Q12959 904 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 LIN52Q52LA3 116 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 EFHC1Q5JVL4 640 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 TCHHL1Q5QJ38 904 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 KYAT3Q6YP21 454 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 FAM183BPQ6ZVS7 135 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 SIGLEC10Q96LC7 697 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 MRPL4Q9BYD3 311 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 FAM192AQ9GZU8 254 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 GPAMQ9HCL2 828 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PNPOQ9NVS9 261 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 ASNSD1Q9NWL6 643 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PACSIN3Q9UKS6 424 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 AFG3L2Q9Y4W6 797 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 KRT38O76015 456 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PROCP04070 461 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PRKCBP05771 671 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 NFICP08651 508 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 FGF3P11487 239 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PDGFRAP16234 1089 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CYP3A5P20815 502 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 GPD1P21695 349 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 CRHR1P34998 444 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 GPD2P43304 727 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 AP3M2P53677 418 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 WASHC5Q12768 1159 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 EEF1DP3Q658K8 133 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 MBLAC2Q68D91 279 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PCDH19Q8TAB3 1148 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 EPAS1Q99814 870 aa12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-203ENST00000462146 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 MED7O43513 233 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 OR6B1O95007 311 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 AOC1P19801 751 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 RGS7P49802 495 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 ZNF143P52747 638 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 HMGCS2P54868 508 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 TARBP2Q15633 366 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 OR6B2Q6IFH4 312 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 NETO2Q8NC67 525 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 KLC2Q9H0B6 622 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 THAP1Q9NVV9 213 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 A6NJR5 290 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 C2CD4BA6NLJ0 364 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 ADCY6O43306 1168 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 OPHN1O60890 802 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 SIN3BO75182 1162 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 KRT34O76011 436 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 TNNC2P02585 160 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 BCAR1P56945 870 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 CUL3Q13618 768 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 PRKG1Q13976 671 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 PPP6R3Q5H9R7 873 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 LGSNQ5TDP6 509 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 FBXL19Q6PCT2 694 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 C1orf127Q8N9H9 656 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms