RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PNKP	Q96T60	521 aa		13.34	□□□□□ -0.27
FDPS-204	ENST00000461507	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.34	□□□□□ -0.27
FDPS-204	ENST00000461507	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
FDPS-204	ENST00000461507	FHOD1	Q9Y613	1164 aa		13.34	□□□□□ -0.27
FDPS-204	ENST00000461507	TPR	P12270	2363 aa	Known RBP	13.34	□□□□□ -0.27
FDPS-204	ENST00000461507		A0A1W2PQH9	124 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	TULP2	O00295	520 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	GREM1	O60565	184 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	TLR5	O60602	858 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	KAT7	O95251	611 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SERPINC1	P01008	464 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ZNF806	P0C7X5	589 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	KIR2DL1	P43626	348 aa	Predicted RBP	13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	PGF	P49763	221 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	PTK2	Q05397	1052 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	NCAPH	Q15003	741 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SYCP1	Q15431	976 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	NFKBIB	Q15653	356 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	LY6G5C	Q5SRR4	150 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	KLHDC10	Q6PID8	442 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	LCLAT1	Q6UWP7	414 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	C11orf74	Q86VG3	221 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	PASD1	Q8IV76	773 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	DHX40	Q8IX18	779 aa	Known RBP	13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ZNF276	Q8N554	614 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	TSTD1	Q8NFU3	115 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	NEK11	Q8NG66	645 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SPAG5	Q96R06	1193 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	BPIFA3	Q9BQP9	254 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ULBP1	Q9BZM6	244 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SIX2	Q9NPC8	291 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ACP6	Q9NPH0	428 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	LIMA1	Q9UHB6	759 aa	Known RBP	13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	NUDT5	Q9UKK9	219 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SCML2	Q9UQR0	700 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	SH3BP1	Q9Y3L3	701 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ABCA7	Q8IZY2	2146 aa		13.33	□□□□□ -0.28
FDPS-204	ENST00000461507	ACACB	O00763	2458 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	FAM170A	A1A519	330 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	ANTXRL	A6NF34	631 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	LGALS16	A8MUM7	142 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	RALA	P11233	206 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	RARG	P13631	454 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	GRIA2	P42262	883 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	SLC6A11	P48066	632 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	KIF11	P52732	1056 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	ZNF132	P52740	706 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	POLR2F	P61218	127 aa	Known RBP	13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	GAD2	Q05329	585 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	KCNMA1	Q12791	1236 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	DRAP1	Q14919	205 aa	Predicted RBP	13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	CNGA2	Q16280	664 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	CRY1	Q16526	586 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	C10orf120	Q5SQS8	335 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	KLHDC7A	Q5VTJ3	777 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	DENND1B	Q6P3S1	775 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	HTR3D	Q70Z44	454 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	LUZP1	Q86V48	1076 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	BBS7	Q8IWZ6	715 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	IL17RC	Q8NAC3	791 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	OLIG1	Q8TAK6	271 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	GOLGA1	Q92805	767 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	WBP2	Q969T9	261 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	KLF16	Q9BXK1	252 aa	Predicted RBP	13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	MIS12	Q9H081	205 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	ARRDC1-AS1	Q9H2J1	176 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	CBX8	Q9HC52	389 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	NLRC4	Q9NPP4	1024 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	MARK1	Q9P0L2	795 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	RASAL2	Q9UJF2	1139 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	THADA	Q6YHU6	1953 aa		13.32	□□□□□ -0.28
FDPS-204	ENST00000461507	MDM4	O15151	490 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	GDF9	O60383	454 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	ZBED1	O96006	694 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	APOD	P05090	189 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	UCHL3	P15374	230 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	ZNF18	P17022	549 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	KRT9	P35527	623 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	MPL	P40238	635 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	TNFRSF4	P43489	277 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	DGKE	P52429	567 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	GOLGA8F	Q08AF8	430 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	GOLGA8DP	Q0D2H9	430 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	ELF2	Q15723	593 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	C2orf27A	Q580R0	203 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	TAF3	Q5VWG9	929 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	BTBD8	Q5XKL5	378 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	PMS2CL	Q68D20	193 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	CCDC186	Q7Z3E2	898 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	TADA2B	Q86TJ2	420 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	MIB1	Q86YT6	1006 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	SFTPA1	Q8IWL2	248 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	ARHGAP18	Q8N392	663 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	KCNV2	Q8TDN2	545 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	SHC3	Q92529	594 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	NDRG1	Q92597	394 aa	Known RBP	13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms