RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF341Q9BYN7 854 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 UBXN6Q9BZV1 441 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.13□□□□□ -1.11
BRCC3-208ENST00000453705 OPA3Q9H6K4 179 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 BAG5Q9UL15 447 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF215Q9UL58 517 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-208ENST00000453705 PIAS3Q9Y6X2 628 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
BRCC3-208ENST00000453705 EME2A4GXA9 379 aaPredicted RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 HNRNPCL2B2RXH8 293 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ARHGAP6O43182 974 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ATP8B1O43520 1251 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 HNRNPCL1O60812 293 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 DIAPH2O60879 1101 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 SFPQP23246 707 aaKnown RBP eCLIP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ANXA13P27216 316 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 EVI2BP34910 448 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 PRCPP42785 496 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 MAGEA9P43362 315 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 AUHQ13825 339 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 KIAA1755Q5JYT7 1200 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 RNF220Q5VTB9 566 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TTC7BQ86TV6 843 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CD302Q8IX05 232 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CARFQ8N187 725 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 PCSK9Q8NBP7 692 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 LILRB4Q8NHJ6 448 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TRAPPC12Q8WVT3 735 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TEKT4Q8WW24 435 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 P2RX5Q93086 422 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TMEM169Q96HH4 297 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 NUP88Q99567 741 aaPredicted RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 P2RX7Q99572 595 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 PRRX2Q99811 253 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 SNX15Q9NRS6 342 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TNFSF13BQ9Y275 285 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 NAALAD2Q9Y3Q0 740 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF536O15090 1300 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 POLR2AP24928 1970 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 A0A1W2PQJ5 194 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 FAM234BA2RU67 622 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 LYPLA2O95372 231 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 RARBP10826 455 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CKBP12277 381 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 HPGDP15428 266 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TSHRP16473 764 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 AFMP43652 599 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CDK17Q00537 523 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 DOC2AQ14183 400 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 VEPH1Q14D04 833 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 HADHQ16836 314 aaKnown RBP8.12□□□□□ -1.11
BRCC3-208ENST00000453705 LONRF2Q1L5Z9 754 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ZCWPW2Q504Y3 356 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 IGSF11Q5DX21 431 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TCP11X2Q5H9J9 407 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 KIAA1211LQ6NV74 962 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF765Q7L2R6 523 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TMC6Q7Z403 805 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 IRF2BP1Q8IU81 584 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 SMC1BQ8NDV3 1235 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ANKRD20A12PQ8NF67 263 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 JADE3Q92613 823 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 PKP4Q99569 1192 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 RIT2Q99578 217 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 VAT1LQ9HCJ6 419 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 NRIP3Q9NQ35 241 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 KIAA1257Q9ULG3 409 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 TIMM22Q9Y584 194 aa8.12□□□□□ -1.11
BRCC3-208ENST00000453705 A0A087WWV3 80 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 URADA6NGE7 173 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TP73O15350 636 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 FFAR2O15552 330 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 CSF2RAP15509 400 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 H2AFXP16104 143 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 COPB1P53618 953 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ARL4CP56559 192 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PPP2R2AP63151 447 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 UBE2SQ16763 222 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PPP1R21Q6ZMI0 780 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 RETREG3Q86VR2 466 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TC2NQ8N9U0 490 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF671Q8TAW3 534 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PIGOQ8TEQ8 1089 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.112e-6■■□□□ 14.2
BRCC3-208ENST00000453705 PSKH2Q96QS6 385 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ERGIC2Q96RQ1 377 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TSGA10Q9BZW7 698 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SLC38A10Q9HBR0 1119 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 THG1LQ9NWX6 298 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 R3HDM2Q9Y2K5 976 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 1139.6 ms