RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 INTS2Q9H0H0 1204 aaKnown RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 DUSP15Q9H1R2 295 aaPredicted RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 OLA1Q9NTK5 396 aaKnown RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 DNAJC17Q9NVM6 304 aaKnown RBP20.32■□□□□ 0.84
USP40-207ENST00000450940 STRIP2Q9ULQ0 834 aa20.32■□□□□ 0.84
USP40-207ENST00000450940 YJEFN3A6XGL0 299 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 E7ENQ6 273 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 FOXD2O60548 495 aaPredicted RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 PENKP01210 267 aaPredicted RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 CHKAP35790 457 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 TRIP4Q15650 581 aaPredicted RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 BSPRYQ5W0U4 402 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 PMF1Q6P1K2 205 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 TPGS1Q6ZTW0 290 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 RSRC2Q7L4I2 434 aaKnown RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 FAM217AQ8IXS0 508 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 ABCA7Q8IZY2 2146 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 OLIG1Q8TAK6 271 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 CLSTN2Q9H4D0 955 aa20.31■□□□□ 0.84
USP40-207ENST00000450940 AGO1Q9UL18 857 aaKnown RBP20.31■□□□□ 0.84
USP40-207ENST00000450940 BRD2P25440 801 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 CORO1AP31146 461 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 RPL34P49207 117 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 DAOAP59103 153 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 USP39Q53GS9 565 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 C10orf76Q5T2E6 689 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 FYB2Q5VWT5 728 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 SMYD5Q6GMV2 418 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 TRMT11Q7Z4G4 463 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 C11orf74Q86VG3 221 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 SIX6OS1Q8N1H7 587 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 CPXM2Q8N436 756 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 ZNF513Q8N8E2 541 aaPredicted RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 MDGA1Q8NFP4 955 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 IRGQQ8WZA9 623 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 PLD4Q96BZ4 506 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 HSFY1Q96LI6 401 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 POLMQ9NP87 494 aaPredicted RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 ABCC13Q9NSE7 274 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 HBS1LQ9Y450 684 aaKnown RBP20.3■□□□□ 0.84
USP40-207ENST00000450940 PCDHGA5Q9Y5G8 931 aa20.3■□□□□ 0.84
USP40-207ENST00000450940 THADAQ6YHU6 1953 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 SLC12A8A0AV02 714 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 ALDH1A2O94788 518 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 HMBSP08397 361 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 MEA1Q16626 185 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 PLA2G2CQ5R387 149 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 ANO7Q6IWH7 933 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 PRR23CQ6ZRP0 262 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 ENOSF1Q7L5Y1 443 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 SLC27A6Q9Y2P4 619 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.29■□□□□ 0.84
USP40-207ENST00000450940 NUP205Q92621 2012 aa20.29■□□□□ 0.84
USP40-207ENST00000450940 GTPBP10A4D1E9 387 aaKnown RBP20.28■□□□□ 0.84
USP40-207ENST00000450940 PRRT4C9JH25 899 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 M0QYV0 167 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 DCLK1O15075 740 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 RHOBTB1O94844 696 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 CALCAP01258 141 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 ZNF806P0C7X5 589 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 DGKGP49619 791 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 MSANTD2Q6P1R3 559 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 TRIM65Q6PJ69 517 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 TOGARAM2Q6ZUX3 1019 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 DENND1CQ8IV53 801 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 FMNL3Q8IVF7 1028 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 RNF139Q8WU17 664 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 FAM81BQ96LP2 452 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 TPSD1Q9BZJ3 242 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 ARRDC1-AS1Q9H2J1 176 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 UBE2TQ9NPD8 197 aaPredicted RBP20.28■□□□□ 0.84
USP40-207ENST00000450940 ZDHHC4Q9NPG8 344 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 STOML2Q9UJZ1 356 aa20.28■□□□□ 0.84
USP40-207ENST00000450940 GFRA2O00451 464 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 FBXO21O94952 628 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 LCP1P13796 627 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 NTSR1P30989 418 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 GPD2P43304 727 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 RGS7P49802 495 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 ELF2Q15723 593 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 EDEM1Q92611 657 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 CD248Q9HCU0 757 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 PLK2Q9NYY3 685 aa20.27■□□□□ 0.84
USP40-207ENST00000450940 DNAH14Q0VDD8 3507 aa20.27■□□□□ 0.83
USP40-207ENST00000450940 A0A1W2PQF6 199 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 LATS1O95835 1130 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 SLC9A1P19634 815 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 P2RY2P41231 377 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 ATXN1P54253 815 aaKnown RBP20.26■□□□□ 0.83
USP40-207ENST00000450940 MFAP3P55082 362 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 EGFLAMQ63HQ2 1017 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 PMS2CLQ68D20 193 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 GBP6Q6ZN66 633 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 DGLUCYQ7Z3D6 616 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 NETO1Q8TDF5 533 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 STK32AQ8WU08 396 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 GABRG3Q99928 467 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 RTKNQ9BST9 563 aa20.26■□□□□ 0.83
USP40-207ENST00000450940 CRACR2AQ9BSW2 395 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms