RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 DLDP09622 509 aaKnown RBP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 TMEM225BP0DP42 221 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 GYS1P13807 737 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 YY1P25490 414 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 KLRK1P26718 216 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 AVPR1BP47901 424 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 PNLIPRP1P54315 467 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 PDE1AP54750 535 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 TPTEP56180 551 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 EIF4A1P60842 406 aaKnown RBP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 MTAPQ13126 283 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 GRM4Q14833 912 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 TIGD6Q17RP2 521 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 RINT1Q6NUQ1 792 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 SASS6Q6UVJ0 657 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF551Q7Z340 670 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 SLC44A2Q8IWA5 706 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 HSCBQ8IWL3 235 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 SLC44A3Q8N4M1 653 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 OR1N1Q8NGS0 311 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 LINC00476Q8WZB0 136 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 TFAP2BQ92481 460 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 RUBCNQ92622 972 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 ZNF341Q9BYN7 854 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 PABPC3Q9H361 631 aaKnown RBP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 CYP4F11Q9HBI6 524 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 SAYSD1Q9NPB0 183 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 FSCN3Q9NQT6 498 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 PRDM8Q9NQV8 689 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 LPAR3Q9UBY5 353 aa5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P16-201ENST00000447155 TRPM1Q7Z4N2 1603 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 MYO5CQ9NQX4 1742 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 CFAP74Q9C0B2 1584 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 CCDC151A5D8V7 595 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 PMPCBO75439 489 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 TAF5LO75529 589 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 URI1O94763 535 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 TJP3O95049 919 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 NR2F6P10588 404 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 CST5P28325 142 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 AKT1P31749 480 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 GKP32189 559 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 DGKQP52824 942 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 MPP3Q13368 585 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 TAF5Q15542 800 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 TRIM60Q495X7 471 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 KAZNQ674X7 775 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 Q6YL49 198 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 USP51Q70EK9 711 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 WDR53Q7Z5U6 358 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 LRRC71Q8N4P6 559 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 RP9Q8TA86 221 aaKnown RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 OVCA2Q8WZ82 227 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 DDX23Q9BUQ8 820 aaKnown RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 MLXIPQ9HAP2 919 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 ITM2CQ9NQX7 267 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 ARHGEF3Q9NR81 526 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 KIF17Q9P2E2 1029 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 SRP68Q9UHB9 627 aaKnown RBP5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 NFU1Q9UMS0 254 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 GTF2A1LQ9UNN4 478 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 COL4A3Q01955 1670 aa5.01□□□□□ -1.61
HMGB1P16-201ENST00000447155 ATAD2BQ9ULI0 1458 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CGNL1Q0VF96 1302 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SYNMO15061 1565 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 NCOA3Q9Y6Q9 1424 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SPRY2O43597 315 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 NARSO43776 548 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 ORC4O43929 436 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 FAM155BO75949 473 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 ESRRBO95718 433 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CREB1P16220 341 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 DRD1P21728 446 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 PCSK6P29122 969 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 MPLP40238 635 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 PBX1P40424 430 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SUMO2P61956 95 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 MRPS35P82673 323 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 E2F1Q01094 437 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CYP1B1Q16678 543 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 ADCK5Q3MIX3 580 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 TMEM196Q5HYL7 178 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 NFRKBQ6P4R8 1299 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 MTHFD1LQ6UB35 978 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 DPY19L3Q6ZPD9 716 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 Q6ZWC4 215 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 PARS2Q7L3T8 475 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 RAB11FIP2Q7L804 512 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 MOGAT3Q86VF5 341 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CREBRFQ8IUR6 639 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CLASRPQ8N2M8 674 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SIRT6Q8N6T7 355 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 NGDNQ8NEJ9 315 aaKnown RBP5□□□□□ -1.61
HMGB1P16-201ENST00000447155 SPPL3Q8TCT6 385 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CAVIN3Q969G5 261 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 CTHRC1Q96CG8 243 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 WDYHV1Q96HA8 205 aa5□□□□□ -1.61
HMGB1P16-201ENST00000447155 VPS50Q96JG6 964 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms