RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
TTC3-208ENST00000428693 ACOX2Q99424 681 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 NUSAP1Q9BXS6 441 aaKnown RBP12.62□□□□□ -0.39
TTC3-208ENST00000428693 LRRC4Q9HBW1 653 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 TMEM9BQ9NQ34 198 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 MARCH2Q9P0N8 246 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 CYP8B1Q9UNU6 501 aa12.62□□□□□ -0.39
TTC3-208ENST00000428693 LNP1A1A4G5 178 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 AP5Z1O43299 807 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 CACNG3O60359 315 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 GREM1O60565 184 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 ZBED1O96006 694 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 CYBBP04839 570 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 LCP1P13796 627 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 GABRG2P18507 467 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 NOVA1P51513 510 aaKnown RBP12.61□□□□□ -0.39
TTC3-208ENST00000428693 IRX4P78413 519 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 ARID5AQ03989 594 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 CUL2Q13617 745 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 TRIM61Q5EBN2 209 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 N4BP2L1Q5TBK1 243 aaPredicted RBP12.61□□□□□ -0.39
TTC3-208ENST00000428693 LYSMD4Q5XG99 296 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
TTC3-208ENST00000428693 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 RNF139Q8WU17 664 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 ULBP1Q9BZM6 244 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 MBD1Q9UIS9 605 aaPredicted RBP12.61□□□□□ -0.39
TTC3-208ENST00000428693 TSPAN16Q9UKR8 245 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 ZNF510Q9Y2H8 683 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 PCDHB4Q9Y5E5 795 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 USP3Q9Y6I4 520 aa12.61□□□□□ -0.39
TTC3-208ENST00000428693 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 TULP2O00295 520 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 PIK3R2O00459 728 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 TSPAN3O60637 253 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 NDUFS2O75306 463 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 KCNK5O95279 499 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 KLKB1P03952 638 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 ITPKAP23677 461 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 CHKAP35790 457 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
TTC3-208ENST00000428693 BCAT1P54687 386 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 PDE4CQ08493 712 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 ADIGQ0VDE8 80 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 STARD3Q14849 445 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 MAP7D1Q3KQU3 841 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 KIAA1211LQ6NV74 962 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 TMEM270Q6UE05 265 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 Q6ZNB5 142 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 PPM1KQ8N3J5 372 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 EDEM1Q92611 657 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
TTC3-208ENST00000428693 GTPBP2Q9BX10 602 aaKnown RBP12.6□□□□□ -0.39
TTC3-208ENST00000428693 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
TTC3-208ENST00000428693 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
TTC3-208ENST00000428693 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
TTC3-208ENST00000428693 BIN1O00499 593 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 SYNCRIPO60506 623 aaKnown RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 NDUFV2P19404 249 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 TBXAS1P24557 533 aaPredicted RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 RGS7P49802 495 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 CETN1Q12798 172 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 LMAN2Q12907 356 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 SH3PXD2AQ5TCZ1 1133 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 SLC36A4Q6YBV0 504 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 RGL4Q8IZJ4 473 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 UCMAQ8WVF2 138 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 GTPBP4Q9BZE4 634 aaKnown RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 UBXN6Q9BZV1 441 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
TTC3-208ENST00000428693 FSCN3Q9NQT6 498 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 TMEM74BQ9NUR3 256 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 SFMBT1Q9UHJ3 866 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 ANGPTL2Q9UKU9 493 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 HCN2Q9UL51 889 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 CTNND2Q9UQB3 1225 aa12.59□□□□□ -0.39
TTC3-208ENST00000428693 STARD13Q9Y3M8 1113 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms