RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 FAM220BPB1ANY3 271 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 AREL1O15033 823 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 TYMPP19971 482 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 OR1E1P30953 314 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 RASGRP2Q7LDG7 609 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 KLC4Q9NSK0 619 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 MRPS7Q9Y2R9 242 aaKnown RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 SNTNA6NMZ2 147 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 IRX1P78414 480 aaPredicted RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 SMU1Q2TAY7 513 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 ANKRD13AQ8IZ07 590 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 TP53INP1Q96A56 240 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 GRIP2Q9C0E4 1043 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 ANKARQ7Z5J8 1434 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 ZNF862O60290 1169 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 SERPINB9P50453 376 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 FBXL19Q6PCT2 694 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 OMA1Q96E52 524 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 PXMP2Q9NR77 195 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 MSRAQ9UJ68 235 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 HS6ST1O60243 411 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 MTRF1O75570 445 aaKnown RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 USP11P51784 963 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 ACAP2Q15057 778 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 RIPOR1Q6ZS17 1223 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 SLFN11Q7Z7L1 901 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 NAT16Q8N8M0 369 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 KRT35Q92764 455 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 CTNNAL1Q9UBT7 734 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 USP20Q9Y2K6 914 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 C19orf81C9J6K1 198 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 O00370 1275 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DMPKQ09013 629 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 EMID1Q96A84 441 aaPredicted RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ADGRE3Q9BY15 652 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 KLHL28Q9NXS3 571 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 FLT1P17948 1338 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ERBB4Q15303 1308 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DNALI1O14645 258 aaPredicted RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 EXTL3O43909 919 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 PLEKP08567 350 aaPredicted RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 NDUFV1P49821 464 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 CYLC2Q14093 348 aaPredicted RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 MRPL48Q96GC5 212 aaKnown RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DPY30Q9C005 99 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 EPHX2P34913 555 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 CCL23P55773 120 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ATP10BO94823 1461 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 CCDC189A1A4V9 331 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 TPD52L2O43399 206 aaKnown RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ZCCHC18P0CG32 403 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 FEZF2Q8TBJ5 459 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 PMEPA1Q969W9 287 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ARL2BPQ9Y2Y0 163 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 PFASO15067 1338 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 FAM135BQ49AJ0 1406 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 SPIDRQ14159 915 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 TRIQKQ629K1 86 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 ILDR2Q71H61 639 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DNAAF5Q86Y56 855 aa18.96■□□□□ 0.63
SHANK3-202ENST00000414786 DDX43Q9NXZ2 648 aaKnown RBP18.96■□□□□ 0.63
SHANK3-202ENST00000414786 JAMLQ86YT9 394 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 GPAMQ9HCL2 828 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 SEC22BO75396 215 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 SLC25A12O75746 678 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 ATG7O95352 703 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 FAM86B2P0C5J1 330 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 EPORP19235 508 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 C11orf63Q6NUN7 778 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 CASP12Q6UXS9 341 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 ZNF621Q6ZSS3 439 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 FAM172AQ8WUF8 416 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 MKNK1Q9BUB5 465 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 ERCC2P18074 760 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 GPAT3Q53EU6 434 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 OLFML2AQ68BL7 652 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 ESRP1Q6NXG1 681 aaKnown RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 EFCAB3Q8N7B9 438 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 RIBC2Q9H4K1 309 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 INSRP06213 1382 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 FMO4P31512 558 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 MAGEA10P43363 369 aaPredicted RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 LINC00523Q86TU6 105 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 RASAL3Q86YV0 1011 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 C19orf60Q96EN9 201 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 PRMT7Q9NVM4 692 aaPredicted RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 OR10H1Q9Y4A9 318 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 PVALEFA0A1B0GWK0 134 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM120BA0PK00 339 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 KLHL2O95198 593 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 SGPL1O95470 568 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 PLK1P53350 603 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 LGI2Q8N0V4 545 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 AP4E1Q9UPM8 1137 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 CUL7Q14999 1698 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 BIRC5O15392 142 aa18.95■□□□□ 0.62
SHANK3-202ENST00000414786 POLR2EP19388 210 aaKnown RBP18.95■□□□□ 0.62
SHANK3-202ENST00000414786 MTAPQ13126 283 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms