RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 EPC1Q9H2F5 836 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 DNAJC17Q9NVM6 304 aaKnown RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 MARK1Q9P0L2 795 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SFMBT1Q9UHJ3 866 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 SMG5Q9UPR3 1016 aaKnown RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 HBS1LQ9Y450 684 aaKnown RBP11.72□□□□□ -0.53
RFFL-204ENST00000414419 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
RFFL-204ENST00000414419 MYO15AQ9UKN7 3530 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 A0A0A0MRY4 1105 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 CCDC163A0A0D9SF12 145 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 APBB3O95704 486 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 LTFP02788 710 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 KLKB1P03952 638 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 NCAM1P13591 858 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 KRT9P35527 623 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 PXNP49023 591 aaPredicted RBP11.71□□□□□ -0.53
RFFL-204ENST00000414419 SNX16P57768 344 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 BPIFB4P59827 614 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 DMWDQ09019 674 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 HSF5Q4G112 596 aaPredicted RBP11.71□□□□□ -0.53
RFFL-204ENST00000414419 EOGTQ5NDL2 527 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 FKBP15Q5T1M5 1219 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 BHLHA9Q7RTU4 235 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 TRMT11Q7Z4G4 463 aaKnown RBP11.71□□□□□ -0.53
RFFL-204ENST00000414419 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 ETFBKMTQ8IXQ9 262 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 TSTD1Q8NFU3 115 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 STK32AQ8WU08 396 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 BHMTQ93088 406 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 NOX5Q96PH1 765 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 HHIPQ96QV1 700 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 TRIM62Q9BVG3 475 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 ACP6Q9NPH0 428 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 TAB2Q9NYJ8 693 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 PLK2Q9NYY3 685 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 GMEB2Q9UKD1 530 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 AGO1Q9UL18 857 aaKnown RBP11.71□□□□□ -0.53
RFFL-204ENST00000414419 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
RFFL-204ENST00000414419 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 BECN2A8MW95 431 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 FOXN3O00409 490 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 CAPN9O14815 690 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 AXIN1O15169 862 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 HRO43593 1189 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 CACNG3O60359 315 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 DGKGP49619 791 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 DGKEP52429 567 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 TRIP4Q15650 581 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 LPAL2Q16609 132 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 SDE2Q6IQ49 451 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 ALLCQ8N6M5 410 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 ZNF513Q8N8E2 541 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 TERB1Q8NA31 727 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 TXNDC5Q8NBS9 432 aaKnown RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 KCNV2Q8TDN2 545 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 CLEC4CQ8WTT0 213 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 VPS16Q9H269 839 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 POLMQ9NP87 494 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 SIX2Q9NPC8 291 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 POLR3BQ9NW08 1133 aaPredicted RBP11.7□□□□□ -0.54
RFFL-204ENST00000414419 FANCLQ9NW38 375 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 MMP17Q9ULZ9 603 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 WDR87Q6ZQQ6 2873 aa11.7□□□□□ -0.54
RFFL-204ENST00000414419 E5RJQ4 531 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 ZBTB24O43167 697 aaPredicted RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 MSI1O43347 362 aaKnown RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 RPP40O75818 363 aaKnown RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 GABBR2O75899 941 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 RPL34P49207 117 aaKnown RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 ZNF445P59923 1031 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 MYL5Q02045 173 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 MESP2Q0VG99 397 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 KRT31Q15323 416 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 CRY1Q16526 586 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 EMC10Q5UCC4 262 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 KLHDC7AQ5VTJ3 777 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 NUGGCQ68CJ6 796 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 LAIR1Q6GTX8 287 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 MSANTD2Q6P1R3 559 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 C11orf57Q6ZUT1 292 aaPredicted RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 PHTF2Q8N3S3 785 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 DCLK2Q8N568 766 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms