RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 AFF1P51825 1210 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 HUNKP57058 714 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 SLC8A3P57103 927 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CCNA1P78396 465 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 ACVR2BQ13705 512 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 KPNB1Q14974 876 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 TRMT10BQ6PF06 316 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 ALYREFQ86V81 257 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 AZIN2Q96A70 460 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 DRG1Q9Y295 367 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 TCRBV9S1A1TA0A576 114 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 H3BRJ5 948 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 FZD9O00144 591 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TREHO43280 583 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TYROBPO43914 113 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 DNAJC6O75061 913 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 PEX11AO75192 247 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 KRT36O76013 467 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 T-ENOLP0DO92 83 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 PTDSS1P48651 473 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 RTP1P59025 263 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 DPYSL3Q14195 570 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 CFAP157Q5JU67 520 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 XRRA1Q6P2D8 792 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TTC13Q8NBP0 860 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 DNERQ8NFT8 737 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 NKD2Q969F2 451 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 B3GALT6Q96L58 329 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 PEBP4Q96S96 227 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TTC1Q99614 292 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SNRNP25Q9BV90 132 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SPON1Q9HCB6 807 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 ETNK2Q9NVF9 386 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 CPSF3Q9UKF6 684 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 CNTRLQ7Z7A1 2325 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 TXNDC9O14530 226 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 NCAM1P13591 858 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SNAPC2Q13487 334 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 KHDC1Q4VXA5 237 aaKnown RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 MPP5Q8N3R9 675 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 SLC7A6OSQ96CW6 309 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 GAD1Q99259 594 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 ACSS3Q9H6R3 686 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
COL6A2-204ENST00000409416 EURLQ9NYK6 297 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 NUP205Q92621 2012 aa13.85□□□□□ -0.19
COL6A2-204ENST00000409416 GOLGA8QA0A0J9YX86 632 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 GOLGA8OA6NCC3 632 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 GOLGA8NF8WBI6 632 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 LSM8O95777 96 aaKnown RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 RBBP5Q15291 538 aaKnown RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 TAF1CQ15572 869 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 EFHC2Q5JST6 749 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 KCNT2Q6UVM3 1135 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 ARFGAP1Q8N6T3 406 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 NUMBLQ9Y6R0 609 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 WDR27A2RRH5 827 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 PTPN4P29074 926 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 MSX2P35548 267 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 FAM117BQ6P1L5 589 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 DEFB106AQ8N104 65 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 RNF148Q8N7C7 305 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 PTPRHQ9HD43 1115 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 BNIP3LO60238 219 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 LYPLA1O75608 230 aaPredicted RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 CYP2F1P24903 491 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 CHI3L2Q15782 390 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 GEN1Q17RS7 908 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 WSCD1Q658N2 575 aa13.84□□□□□ -0.19
COL6A2-204ENST00000409416 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
COL6A2-204ENST00000409416 BRWD3Q6RI45 1802 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 B3GAT3O94766 335 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 ERVK-10P10266 1014 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.19
COL6A2-204ENST00000409416 TAP1Q03518 808 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 MBTD1Q05BQ5 628 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 PPP1R2P3Q6NXS1 205 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 BBS12Q6ZW61 710 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 XYLT1Q86Y38 959 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 NAT8LQ8N9F0 302 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 DNAJC9Q8WXX5 260 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 GCOM2Q9BZD3 368 aaPredicted RBP13.83□□□□□ -0.19
COL6A2-204ENST00000409416 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.19
COL6A2-204ENST00000409416 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 B2RBV5 119 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 BTBD19C9JJ37 291 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 CCDC22O60826 627 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 USP17L7P0C7H9 530 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 ALADP13716 330 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms