RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 LRMDAQ9H2I8 198 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 GTF2IRD1Q9UHL9 959 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SLC15A5A6NIM6 579 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TRIM49D1C9J1S8 452 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 FAM155BO75949 473 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 APOEP02649 317 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SNRPAP09012 282 aaKnown RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 KCNE1P15382 129 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 MAGEA3P43357 314 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TAF6P49848 677 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SV2CQ496J9 727 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 LGSNQ5TDP6 509 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 NCBP2-AS2Q69YL0 99 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 KCNT2Q6UVM3 1135 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 DNAJB3Q8WWF6 145 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 PTPRN2Q92932 1015 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TBC1D31Q96DN5 1066 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 PLAC1Q9HBJ0 212 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 ALG13Q9NP73 1137 aaKnown RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 SLC5A4Q9NY91 659 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 CXorf49A8MYA2 514 aaPredicted RBP17.43■□□□□ 0.38
NUP50-203ENST00000407019 COPEO14579 308 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 MFSD10Q14728 455 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 SNX17Q15036 470 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 EFHC1Q5JVL4 640 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 HEATR6Q6AI08 1181 aaKnown RBP17.43■□□□□ 0.38
NUP50-203ENST00000407019 UNC5AQ6ZN44 842 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 ZNF534Q76KX8 674 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 INPP5DQ92835 1189 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 APBB2Q92870 758 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 TTC17Q96AE7 1141 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 TNIP3Q96KP6 325 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 TSPAN18Q96SJ8 248 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 IQCGQ9H095 443 aaKnown RBP17.43■□□□□ 0.38
NUP50-203ENST00000407019 ZFP69BQ9UJL9 534 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 NEFHP12036 1026 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 ARL4AP40617 200 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 OVGP1Q12889 678 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 PARP6Q2NL67 630 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 XKR4Q5GH76 650 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 ADGRF2Q8IZF7 708 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 RFWD2Q8NHY2 731 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 TMEM40Q8WWA1 233 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 XAB2Q9HCS7 855 aaKnown RBP17.43■□□□□ 0.38
NUP50-203ENST00000407019 DTLQ9NZJ0 730 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 HAO1Q9UJM8 370 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 MAD1L1Q9Y6D9 718 aa17.43■□□□□ 0.38
NUP50-203ENST00000407019 A8MUI8 341 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 XPO1O14980 1071 aaKnown RBP17.42■□□□□ 0.38
NUP50-203ENST00000407019 HUS1O60921 280 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 AMPD1P23109 780 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 MATKP42679 507 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 SULT1E1P49888 294 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 SEMA5AQ13591 1074 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 PLEKHG4Q58EX7 1191 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 LIMS2Q7Z4I7 341 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 CCDC33Q8N5R6 958 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 GSDMBQ8TAX9 411 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 AGAP11Q8TF27 550 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 SIGLEC10Q96LC7 697 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 SRPK1Q96SB4 655 aaKnown RBP17.42■□□□□ 0.38
NUP50-203ENST00000407019 EBNA1BP2Q99848 306 aaKnown RBP17.42■□□□□ 0.38
NUP50-203ENST00000407019 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 GOLGA2P5Q9HBQ8 144 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 SMYD2Q9NRG4 433 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 DCTN4Q9UJW0 460 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 GNEQ9Y223 722 aaKnown RBP17.42■□□□□ 0.38
NUP50-203ENST00000407019 USP3Q9Y6I4 520 aa17.42■□□□□ 0.38
NUP50-203ENST00000407019 PDCD11Q14690 1871 aaKnown RBP17.42■□□□□ 0.38
NUP50-203ENST00000407019 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 HACD1B0YJ81 288 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 CAPN15O75808 1086 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 DGKIO75912 1065 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 GOT1P17174 413 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 BGNP21810 368 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 TKTP29401 623 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 SOX4Q06945 474 aaPredicted RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 HIC1Q14526 733 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 TAF1BQ53T94 588 aaPredicted RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 UBXN11Q5T124 520 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 ZNF449Q6P9G9 518 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 TLK2Q86UE8 772 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 DEFB106AQ8N104 65 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 FAM149B1Q96BN6 582 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 TMEM237Q96Q45 408 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 KANSL3Q9P2N6 904 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 FZD10Q9ULW2 581 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms