RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PTK7Q13308 1070 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 SPDYAQ5MJ70 313 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 LRRC6Q86X45 466 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 MCUQ8NE86 351 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 APOPT1Q96IL0 206 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 VPS11Q9H270 941 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 MOCS1Q9NZB8 636 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 SLC17A6Q9P2U8 582 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 HEY1Q9Y5J3 304 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 C2CD2LO14523 706 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 PYGBP11216 843 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 RABGGTBP53611 331 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 SNX17Q15036 470 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 STILQ15468 1287 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 DGKDQ16760 1214 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 STEAP4Q687X5 459 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 PDIK1LQ8N165 341 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
CPSF7-202ENST00000394888 ERP27Q96DN0 273 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
CPSF7-202ENST00000394888 MYO16Q9Y6X6 1858 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 NDC80O14777 642 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 TREHO43280 583 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 GOT1P17174 413 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 SEMA5AQ13591 1074 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 SLC45A4Q5BKX6 768 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 MKS1Q9NXB0 559 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 KLK14Q9P0G3 267 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 PAK5Q9P286 719 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 ZNF180Q9UJW8 692 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 L3MBTL1Q9Y468 752 aa15.96■□□□□ 0.15
CPSF7-202ENST00000394888 C2orf71A6NGG8 1288 aa15.96■□□□□ 0.14
CPSF7-202ENST00000394888 HGSO14964 777 aaPredicted RBP15.96■□□□□ 0.14
CPSF7-202ENST00000394888 ZDHHC17Q8IUH5 632 aa15.96■□□□□ 0.14
CPSF7-202ENST00000394888 GBP7Q8N8V2 638 aaPredicted RBP15.96■□□□□ 0.14
CPSF7-202ENST00000394888 PAIP2Q9BPZ3 127 aaKnown RBP15.96■□□□□ 0.14
CPSF7-202ENST00000394888 ABHD16BQ9H3Z7 469 aa15.96■□□□□ 0.14
CPSF7-202ENST00000394888 PLXNA3P51805 1871 aa15.96■□□□□ 0.14
CPSF7-202ENST00000394888 CCL15-CCL14A0A0B4J2E2 113 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 GABRDO14764 452 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 ALDH1A2O94788 518 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 TARSP26639 723 aaKnown RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 OVGP1Q12889 678 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 TFDP2Q14188 446 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 CCL15Q16663 113 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 TTC39CQ8N584 583 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 ZSCAN18Q8TBC5 510 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 CYTH2Q99418 400 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 ZNF395Q9H8N7 513 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 NKX1-2Q9UD57 310 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 EMCNQ9ULC0 261 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 PDGFRBP09619 1106 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 NDUFV1P49821 464 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 NIPAL4Q0D2K0 466 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 BST2Q10589 180 aaKnown RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 SEMA3BQ13214 749 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 IQSEC1Q6DN90 963 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 HFE2Q6ZVN8 426 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 SLC2A14Q8TDB8 520 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 WNT8BQ93098 351 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 PPP1R10Q96QC0 940 aaKnown RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 FAM49AQ9H0Q0 323 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 ALG13Q9NP73 1137 aaKnown RBP15.95■□□□□ 0.14
CPSF7-202ENST00000394888 NEU3Q9UQ49 428 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 USH1CQ9Y6N9 552 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 NUP205Q92621 2012 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 KPNA7A9QM74 516 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 MFSD11O43934 449 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 CBX6O95503 412 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 TPSB2P20231 275 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 TPSAB1Q15661 275 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 CLNKQ7Z7G1 428 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 SLC10A4Q96EP9 437 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 MECRQ9BV79 373 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 HAO1Q9UJM8 370 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 AP4E1Q9UPM8 1137 aa15.95■□□□□ 0.14
CPSF7-202ENST00000394888 FAM72CH0Y354 149 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 CLDN5O00501 218 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 SDC4P31431 198 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 PHBP35232 272 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 DPYSQ14117 519 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 FBXO47Q5MNV8 452 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 FAM72AQ5TYM5 149 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 FAM72DQ6L9T8 149 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 KCNT2Q6UVM3 1135 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 GPRIN1Q7Z2K8 1008 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 FAM72BQ86X60 149 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 ADGRF2Q8IZF7 708 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 DNAJB3Q8WWF6 145 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 NPHS2Q9NP85 383 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 NRCAMQ92823 1304 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 GLTPD2A6NH11 291 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 MSH2P43246 934 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 BCAR1P56945 870 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 WASHC5Q12768 1159 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 CCL14Q16627 93 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 NBPF20Q3BBV1 942 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 SYPL2Q5VXT5 272 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 STAMBPL1Q96FJ0 436 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms