RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 FAM220BPB1ANY3 271 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 NR5A2O00482 541 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 MSH4O15457 936 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ST3GAL1Q11201 340 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 TWF1Q12792 350 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 DENND5BQ6ZUT9 1274 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 BTN2A1Q7KYR7 527 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 OTOAQ7RTW8 1153 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 NT5DC3Q86UY8 548 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ULK2Q8IYT8 1036 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ACTRT2Q8TDY3 377 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 KLHL31Q9H511 634 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 NDUFAF1Q9Y375 327 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 BAZ2BQ9UIF8 2168 aaKnown RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 SNAP91O60641 907 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 RAG1P15918 1043 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 EPHB2P29323 1055 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 SLC26A2P50443 739 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 C16orf72Q14CZ0 275 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 AGKQ53H12 422 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 OR6J1Q8NGC5 347 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 TCP10LQ8TDR4 215 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ACMSDQ8TDX5 336 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 PACSIN1Q9BY11 444 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 PDGFCQ9NRA1 345 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 SPASTQ9UBP0 616 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 CRLS1Q9UJA2 301 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 A0A087X1B8 175 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 NUDT17P0C025 328 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ATP6V1C1P21283 382 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 HOXD10P28358 340 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PSMC6P62333 389 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 MIER2Q8N344 545 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 TIMMDC1Q9NPL8 285 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 SPACA6W5XKT8 324 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 ERI2A8K979 691 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 SKAP2O75563 359 aaPredicted RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 SASH3O75995 380 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PIK3CGP48736 1102 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 BNC1Q01954 994 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 TRAF3Q13114 568 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CYP4A22Q5TCH4 519 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 KATNAL2Q8IYT4 538 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CCDC33Q8N5R6 958 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 NMRAL1Q9HBL8 299 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 NWD1Q149M9 1564 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CYP24A1Q07973 514 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ZNF268Q14587 947 aaPredicted RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 PARP6Q2NL67 630 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 AAGABQ6PD74 315 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNX1-202ENST00000380285 ABRAQ8N0Z2 381 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ATG16L2Q8NAA4 619 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ATG4AQ8WYN0 398 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 VAT1Q99536 393 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 SERHL2Q9H4I8 314 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PLGRKTQ9HBL7 147 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 SERHLQ9NQF3 203 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 DPP3Q9NY33 737 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 KLHL20Q9Y2M5 609 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 NEURL4Q96JN8 1562 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 E9PBE3 544 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 SNX3O60493 162 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ARHGEF19Q8IW93 802 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 C2orf69Q8N8R5 385 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ENKURQ8TC29 256 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 BTN2A2Q8WVV5 523 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 EMILIN2Q9BXX0 1053 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 TPST1O60507 370 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ICAM1P05362 532 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 RPL5P46777 297 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 SLC20A1Q8WUM9 679 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 RUSC1Q9BVN2 902 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ADGRE3Q9BY15 652 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ARMC7Q9H6L4 198 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PTPRMP28827 1452 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CLUHO75153 1309 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 PEX1O43933 1283 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 GSTT1P30711 240 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CHI3L1P36222 383 aaPredicted RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 RPL21P46778 160 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 CDH17Q12864 832 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 TRAF2Q12933 501 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 SDE2Q6IQ49 451 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CCDC80Q76M96 950 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 MARK2Q7KZI7 788 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ZDHHC13Q8IUH4 622 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ADHFE1Q8IWW8 467 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 MCOLN2Q8IZK6 566 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 FAM120BQ96EK7 910 aaKnown RBP9.83□□□□□ -0.84
SNX1-202ENST00000380285 UBXN6Q9BZV1 441 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 ADAM28Q9UKQ2 775 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 CLCA2Q9UQC9 943 aa9.83□□□□□ -0.84
SNX1-202ENST00000380285 KRT6AP02538 564 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms