RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 AMPD1P23109 780 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 NR1H3Q13133 447 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 XRCC4Q13426 336 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 SLC45A4Q5BKX6 768 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 HFE2Q6ZVN8 426 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 PSTKQ8IV42 348 aaKnown RBP18.55■□□□□ 0.56
CTSA-204ENST00000372484 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 MRRFQ96E11 262 aaKnown RBP18.55■□□□□ 0.56
CTSA-204ENST00000372484 SLC2A13Q96QE2 648 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 KLC2Q9H0B6 622 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 DDX20Q9UHI6 824 aaKnown RBP18.55■□□□□ 0.56
CTSA-204ENST00000372484 PTCH2Q9Y6C5 1203 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 CACNA2D1P54289 1103 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 DEUP1Q05D60 604 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 GKAP1Q5VSY0 366 aaPredicted RBP18.55■□□□□ 0.56
CTSA-204ENST00000372484 NCBP2-AS2Q69YL0 99 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 TAX1BP1Q86VP1 789 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 ZMIZ2Q8NF64 920 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 CCDC110Q8TBZ0 833 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 SMARCD1Q96GM5 515 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 CNGB3Q9NQW8 809 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 TMEM30AQ9NV96 361 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 RCOR3Q9P2K3 495 aaPredicted RBP18.55■□□□□ 0.56
CTSA-204ENST00000372484 SLC24A2Q9UI40 661 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 RABGEF1Q9UJ41 708 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 USP3Q9Y6I4 520 aa18.55■□□□□ 0.56
CTSA-204ENST00000372484 TSC2P49815 1807 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 THSD7BQ9C0I4 1608 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 ZNF638Q14966 1978 aaKnown RBP18.54■□□□□ 0.56
CTSA-204ENST00000372484 YJEFN3A6XGL0 299 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 E7ENQ6 273 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 TOMM70O94826 608 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 ATP2A2P16615 1042 aaKnown RBP18.54■□□□□ 0.56
CTSA-204ENST00000372484 ACLYP53396 1101 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 GEMIN4P57678 1058 aaKnown RBP18.54■□□□□ 0.56
CTSA-204ENST00000372484 DAOAP59103 153 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 GRIK3Q13003 919 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 KCNT2Q6UVM3 1135 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 GPRIN1Q7Z2K8 1008 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 BNIPLQ7Z465 357 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 METTL23Q86XA0 190 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 CCDC33Q8N5R6 958 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 HASPINQ8TF76 798 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 TMPRSS4Q9NRS4 437 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 ETNK2Q9NVF9 386 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 DTLQ9NZJ0 730 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 CHMP2BQ9UQN3 213 aa18.54■□□□□ 0.56
CTSA-204ENST00000372484 MYO1CO00159 1063 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 CABYRO75952 493 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 USP17L7P0C7H9 530 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 SKIP12755 728 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 KRT15P19012 456 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 ELK3P41970 407 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 BRCC3P46736 316 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 MPP2Q14168 576 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 TRIM71Q2Q1W2 868 aaKnown RBP18.53■□□□□ 0.56
CTSA-204ENST00000372484 EFHC2Q5JST6 749 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 FAXCQ5TGI0 409 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 TRABD2AQ86V40 505 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 SLC7A14Q8TBB6 771 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 FBF1Q8TES7 1133 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 SEC16BQ96JE7 1060 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 GPBP1L1Q9HC44 474 aaPredicted RBP18.53■□□□□ 0.56
CTSA-204ENST00000372484 MLXIPLQ9NP71 852 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 PIGVQ9NUD9 493 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 PSMC3IPQ9P2W1 217 aaPredicted RBP18.53■□□□□ 0.56
CTSA-204ENST00000372484 MFHAS1Q9Y4C4 1052 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 FYNP06241 537 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 APRTP07741 180 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 VIMP08670 466 aaKnown RBP18.53■□□□□ 0.56
CTSA-204ENST00000372484 TUSC3Q13454 348 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 RAB41Q5JT25 222 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 FAM26DQ5JW98 314 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 C4orf22Q6V702 233 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 RNF139Q8WU17 664 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 QKIQ96PU8 341 aaKnown RBP eCLIP18.53■□□□□ 0.56
CTSA-204ENST00000372484 RTP3Q9BQQ7 232 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 RHOBTB2Q9BYZ6 727 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 ACSS3Q9H6R3 686 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 ARHGEF4Q9NR80 690 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 NKIRAS1Q9NYS0 192 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 SRRDQ9UH36 339 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 GGA2Q9UJY4 613 aa18.53■□□□□ 0.56
CTSA-204ENST00000372484 AVILO75366 819 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 KIAA0754O94854 1291 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 CORO7P57737 925 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 EFTUD2Q15029 972 aaKnown RBP eCLIP18.52■□□□□ 0.566e-11■■■■■ 49.2
CTSA-204ENST00000372484 RASA2Q15283 850 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 PKN2Q16513 984 aaKnown RBP18.52■□□□□ 0.56
CTSA-204ENST00000372484 KLHL38Q2WGJ6 581 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 HEATR6Q6AI08 1181 aaKnown RBP18.52■□□□□ 0.56
CTSA-204ENST00000372484 ARHGEF18Q6ZSZ5 1173 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 BZW1Q7L1Q6 419 aaKnown RBP18.52■□□□□ 0.56
CTSA-204ENST00000372484 LRRC34Q8IZ02 419 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 CACNA2D3Q8IZS8 1091 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 ADAM32Q8TC27 787 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 MYLPFQ96A32 169 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 ACBD6Q9BR61 282 aa18.52■□□□□ 0.56
CTSA-204ENST00000372484 FRMD8Q9BZ67 464 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms