RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZNF135P52742 658 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 RTP1P59025 263 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 AUHQ13825 339 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ADRM1Q16186 407 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZACNQ401N2 412 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 GPAMQ9HCL2 828 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 TCF7L2Q9NQB0 619 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 RBM22Q9NW64 420 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 RNF225M0QZC1 329 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 SNX3O60493 162 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 PEX5P50542 639 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 KCNT2Q6UVM3 1135 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 DDI1Q8WTU0 396 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 HIC2Q96JB3 615 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 PRPF18Q99633 342 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 APOL5Q9BWW9 433 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 PRKD2Q9BZL6 878 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 SETD4Q9NVD3 440 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 E9PBE3 544 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 KLHL41O60662 606 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 CCR1P32246 355 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 AVPR1AP37288 418 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 FMO1Q01740 532 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ITGA9Q13797 1035 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 DPYSL3Q14195 570 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 CNGA2Q16280 664 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 GRTP1Q5TC63 336 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 PATL1Q86TB9 770 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 C12orf56Q8IXR9 622 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 LZTR1Q8N653 840 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 TBC1D13Q9NVG8 400 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 C5orf58C9J3I9 102 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 PRPF4O43172 522 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 KPNA6O60684 536 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 DDHD2O94830 711 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 AXLP30530 894 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 CDK7P50613 346 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 FOXR1Q6PIV2 292 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 FUKQ8N0W3 1084 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 FAM162AQ96A26 154 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 VAT1Q99536 393 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 BTBD10Q9BSF8 475 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 FICDQ9BVA6 458 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 MTFR1LQ9H019 292 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ABHD16BQ9H3Z7 469 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 CAAP1Q9H8G2 361 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ACP6Q9NPH0 428 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 RNF112Q9ULX5 631 aa17.57■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZSCAN9O15535 394 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 TPST1O60507 370 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ITGB5P18084 799 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 PGAM1P18669 254 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 NPY2RP49146 381 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 PLOD1Q02809 727 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 NAB1Q13506 487 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 PDPK2PQ6A1A2 396 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 TTC33Q6PID6 262 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 SCUBE3Q8IX30 993 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 FAM9CQ8IZT9 166 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 P2RX7Q99572 595 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ADRA1DP25100 572 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ATP6V1E1P36543 226 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 CD151P48509 253 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ADIGQ0VDE8 80 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 TBC1D19Q8N5T2 526 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZNF556Q9HAH1 456 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 TBC1D23Q9NUY8 699 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 E5RJQ4 531 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 FSCN2O14926 492 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 TBC1D12O60347 775 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 LYPLA2O95372 231 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ASMTLO95671 621 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 ABHD2P08910 425 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 FAAP100Q0VG06 881 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 CDH18Q13634 790 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 KYAT3Q6YP21 454 aaKnown RBP17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLC22A9Q8IVM8 553 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 C17orf80Q9BSJ5 609 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 CYP4F12Q9HCS2 524 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 WWOXQ9NZC7 414 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 APPL1Q9UKG1 709 aa17.56■□□□□ 0.4
TRAPPC11-201ENST00000334690 UPP2O95045 317 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 CELF2O95319 508 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 CRTAMO95727 393 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 ATP6V1B1P15313 513 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 UBA1P22314 1058 aaKnown RBP17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 AMPD1P23109 780 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 ARSHQ5FYA8 562 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 TAF2Q6P1X5 1199 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 IQCKQ8N0W5 287 aa17.55■□□□□ 0.4
TRAPPC11-201ENST00000334690 SNX31Q8N9S9 440 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms