RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 WWP2O00308 870 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 CKMP06732 381 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 MMP10P09238 476 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 PCSK1P29120 753 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 HMGCS2P54868 508 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
PTCH1-201ENST00000331920 RNASE12Q5GAN4 147 aaKnown RBP16.83■□□□□ 0.28
PTCH1-201ENST00000331920 EFCAB12Q6NXP0 572 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 FNDC5Q8NAU1 212 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 FBXL21Q9UKT6 434 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 FAM92AA1XBS5 289 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 CSHL1Q14406 222 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 APOL4Q9BPW4 351 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 DNAJB2P25686 324 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 ITGA1P56199 1179 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 EPS8Q12929 822 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 SVOPQ8N4V2 548 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 RBM12Q9NTZ6 932 aaKnown RBP16.83■□□□□ 0.28
PTCH1-201ENST00000331920 UBA2Q9UBT2 640 aaPredicted RBP16.83■□□□□ 0.28
PTCH1-201ENST00000331920 PLA2G4CQ9UP65 541 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 ADGRG1Q9Y653 693 aa16.83■□□□□ 0.28
PTCH1-201ENST00000331920 PRAG1Q86YV5 1406 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 SMCO3A2RU48 225 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 MARSP56192 900 aaKnown RBP16.82■□□□□ 0.28
PTCH1-201ENST00000331920 DCP1BQ8IZD4 617 aaKnown RBP16.82■□□□□ 0.28
PTCH1-201ENST00000331920 TSPAN3O60637 253 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 SLC25A12O75746 678 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CYP2E1P05181 493 aaPredicted RBP16.82■□□□□ 0.28
PTCH1-201ENST00000331920 ODC1P11926 461 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 COMTP21964 271 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 OMPP47874 163 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 ACOX1Q15067 660 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 RASSF6Q6ZTQ3 369 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 WDR35Q9P2L0 1181 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 VPS28Q9UK41 221 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 ITGB3P05106 788 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CYP2B6P20813 491 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 SGCGQ13326 291 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 FBXO32Q969P5 355 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 MKNK1Q9BUB5 465 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CUL7Q14999 1698 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CHP2O43745 196 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 PRKAG1P54619 331 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 DGUOKQ16854 277 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 ATF7IP2Q5U623 682 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 EEF1AKMT1Q8WVE0 214 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 DPY30Q9C005 99 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 NUAK2Q9H093 628 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 UBE2QL1A1L167 161 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 GRAPQ13588 217 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
PTCH1-201ENST00000331920 TRNT1Q96Q11 434 aaKnown RBP16.82■□□□□ 0.28
PTCH1-201ENST00000331920 NCK1P16333 377 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CBWD3Q5JTY5 395 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CBWD5Q5RIA9 395 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 CCDC126Q96EE4 140 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 MASTLQ96GX5 879 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF354BQ96LW1 612 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 YME1L1Q96TA2 773 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 LRRC4BQ9NT99 713 aa16.82■□□□□ 0.28
PTCH1-201ENST00000331920 A0A0X1KG70 313 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
PTCH1-201ENST00000331920 RAD23AP54725 363 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ZNF621Q6ZSS3 439 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 PROX1Q92786 737 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 RACGAP1Q9H0H5 632 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 SEMA6AQ9H2E6 1030 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ATAD3AQ9NVI7 634 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 FASP25445 335 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 CBX5P45973 191 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 KLK7P49862 253 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 C4orf46Q504U0 113 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 MZT2BQ6NZ67 158 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 NT5MQ9NPB1 228 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 LRCH1Q9Y2L9 728 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 TRIM64A6NGJ6 449 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ATP9AO75110 1047 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 IFNGR2P38484 337 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 BOP1Q14137 746 aaKnown RBP16.81■□□□□ 0.28
PTCH1-201ENST00000331920 FAM192AQ9GZU8 254 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 PNMA8CA0A1B0GUJ8 204 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 CBX4O00257 560 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 TP73O15350 636 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 AQP5P55064 265 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 CLVS1Q8IUQ0 354 aaPredicted RBP16.81■□□□□ 0.28
PTCH1-201ENST00000331920 IL17REQ8NFR9 667 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 EPB41L1Q9H4G0 881 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 FKBP14Q9NWM8 211 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 SOHLH2Q9NX45 425 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 DNAJC16Q9Y2G8 782 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 SERPINA3P01011 423 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 MCAMP43121 646 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 RNF145Q96MT1 663 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 GRIP2Q9C0E4 1043 aa16.81■□□□□ 0.28
PTCH1-201ENST00000331920 VPS45Q9NRW7 570 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms