RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ATP5F1P24539 256 aaPredicted RBP16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 RBP5P82980 135 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 RASAL3Q86YV0 1011 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 KIRREL3Q8IZU9 778 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 FFAR2O15552 330 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 RHOAP61586 193 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 NECTIN1Q15223 517 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 MILR1Q7Z6M3 343 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 PACS2Q86VP3 889 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 SLC9A6Q92581 669 aa16.83■□□□□ 0.29
CACNA1A-238ENST00000637276 FAM86B1E9PN63 330 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 KLHL41O60662 606 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 GPAT3Q53EU6 434 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 AKAP7Q9P0M2 348 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 MRPS31Q92665 395 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 KCTD14Q9BQ13 255 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 AAASQ9NRG9 546 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 RASSF6Q6ZTQ3 369 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 JAMLQ86YT9 394 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 SPATA4Q8NEY3 305 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 HPDLQ96IR7 371 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 AFF2P51816 1311 aa16.83■□□□□ 0.28
CACNA1A-238ENST00000637276 HNRNPRO43390 633 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 URODP06132 367 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 EPORP19235 508 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 TALDO1P37837 337 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 CYLC2Q14093 348 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 CHPFQ8IZ52 775 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 MYO1HQ8N1T3 1032 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ARMC7Q9H6L4 198 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 SCN2BO60939 215 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 SERPINA3P01011 423 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 PTGER2P43116 358 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 FCGRTP55899 365 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 RCOR2Q8IZ40 523 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ZNF611Q8N823 705 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 COPS4Q9BT78 406 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 DKK3Q9UBP4 350 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 GULP1Q9UBP9 304 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 LRP8Q14114 963 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 TMEM39BQ9GZU3 492 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 BARHL2Q9NY43 387 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 TRPM5Q9NZQ8 1165 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 SPEF1Q9Y4P9 236 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ABHD14A-ACY1A0A1B0GW23 586 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 GSAPA4D1B5 854 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 LIFRP42702 1097 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 GRB14Q14449 540 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ACAP2Q15057 778 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 NDUFAF6Q330K2 333 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 NEK5Q6P3R8 708 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 NAT16Q8N8M0 369 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 COG5Q9UP83 839 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 KPNA3O00505 521 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 MDH1P40925 334 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 NEDD8Q15843 81 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 CARTPTQ16568 116 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 KCTD19Q17RG1 926 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 TCHHL1Q5QJ38 904 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 MSX1P28360 303 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 PROM2Q8N271 834 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 KLHL23Q8NBE8 558 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 SMPDL3BQ92485 455 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 MARK1Q9P0L2 795 aa16.82■□□□□ 0.28
CACNA1A-238ENST00000637276 RHOCP08134 193 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 ODC1P11926 461 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 IRX1P78414 480 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 ATP6V0D2Q8N8Y2 350 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 SEMA6AQ9H2E6 1030 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 SOAT2O75908 522 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 PPM1AP35813 382 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 POLD2P49005 469 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 ELMO1Q92556 727 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 REXO5Q96IC2 774 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 BPIFA1Q9NP55 256 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 DLGAP2Q9P1A6 1054 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 ATXN2Q99700 1313 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 TMPRSS9Q7Z410 1059 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 TRAPPC5Q8IUR0 188 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 SIRT2Q8IXJ6 389 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 FAM9CQ8IZT9 166 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 CLPBQ9H078 707 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 DNAJC16Q9Y2G8 782 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 GRID2IPA4D2P6 1211 aa16.81■□□□□ 0.28
CACNA1A-238ENST00000637276 NFKB1P19838 968 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms