RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 ANGPTL2Q9UKU9 493 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 CEP192Q8TEP8 1941 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 NEDD8-MDP1E9PL57 170 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 CILPO75339 1184 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 KIF20AO95235 890 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 RARGP13631 454 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 KRT13P13646 458 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 TYRP14679 529 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 KIF11P52732 1056 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 ADAM9Q13443 819 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 ST3GAL2Q16842 350 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF394Q53GI3 561 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 EGFLAMQ63HQ2 1017 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 TOGARAM2Q6ZUX3 1019 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 INTS8Q75QN2 995 aaKnown RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 SCD5Q86SK9 330 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 SMYD4Q8IYR2 804 aaPredicted RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 DEFB119Q8N690 84 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 SEMA4DQ92854 862 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 SPACA7Q96KW9 195 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 ACOX2Q99424 681 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 BBS2Q9BXC9 721 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 TMEM74BQ9NUR3 256 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 DNAJC17Q9NVM6 304 aaKnown RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 STARD13Q9Y3M8 1113 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 PCDHA5Q9Y5H7 936 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 TNRC6BQ9UPQ9 1833 aaKnown RBP11.76□□□□□ -0.53
TARDBP-221ENST00000619555 KNL1Q8NG31 2342 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 PLXND1Q9Y4D7 1925 aa11.76□□□□□ -0.53
TARDBP-221ENST00000619555 A0A1W2PQF6 199 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 PRRT4C9JH25 899 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 HOXB2P14652 356 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 GABRG2P18507 467 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 RPL13P26373 211 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 NTSR1P30989 418 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 PLA2G4AP47712 749 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 PREPLQ4J6C6 727 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 C10orf120Q5SQS8 335 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 KIAA1211LQ6NV74 962 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 NUDT18Q6ZVK8 323 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 TRMT11Q7Z4G4 463 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 GUF1Q8N442 669 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 BHMTQ93088 406 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 EEF2KMTQ96G04 330 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 P2RY11Q96G91 374 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 DUSP16Q9BY84 665 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 TMEM8AQ9HCN3 771 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 PLK2Q9NYY3 685 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 MARK1Q9P0L2 795 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 WDR35Q9P2L0 1181 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 DNMT3LQ9UJW3 386 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 LSM7Q9UK45 103 aaKnown RBP11.75□□□□□ -0.53
TARDBP-221ENST00000619555 FRYQ5TBA9 3013 aa11.75□□□□□ -0.53
TARDBP-221ENST00000619555 ADAMTS9Q9P2N4 1935 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 CACNG3O60359 315 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 KLKB1P03952 638 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 CISD3P0C7P0 127 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 ITPKAP23677 461 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 SHC2P98077 582 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 GOLGA8FQ08AF8 430 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 GOLGA8DPQ0D2H9 430 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 SH3PXD2AQ5TCZ1 1133 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 LYSMD4Q5XG99 296 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 KRT39Q6A163 491 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 KLHDC10Q6PID8 442 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 Q6ZNB5 142 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 CHPFQ8IZ52 775 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 CCDC150Q8NCX0 1101 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
TARDBP-221ENST00000619555 PNPLA8Q9NP80 782 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 EVLQ9UI08 416 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-221ENST00000619555 MAN1B1Q9UKM7 699 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 RAD54BQ9Y620 910 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 USP3Q9Y6I4 520 aa11.74□□□□□ -0.53
TARDBP-221ENST00000619555 ATXN2Q99700 1313 aaKnown RBP11.74□□□□□ -0.53
TARDBP-221ENST00000619555 WASH3PC4AMC7 463 aa11.73□□□□□ -0.53
TARDBP-221ENST00000619555 STC2O76061 302 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms