RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 HHIPQ96QV1 700 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 OLA1Q9NTK5 396 aaKnown RBP19.11■□□□□ 0.65
VCX3A-203ENST00000612369 STRIP2Q9ULQ0 834 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 TBC1D3BA6NDS4 549 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 PRR5-ARHGAP8B1AHC4 643 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 FOXD2O60548 495 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 STC2O76061 302 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 SDHBP21912 280 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 TGM1P22735 817 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 CHKAP35790 457 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 KIR2DL1P43626 348 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 DGKEP52429 567 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 ARHGAP8P85298 464 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 LMNB2Q03252 620 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 KDSRQ06136 332 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 CRY1Q16526 586 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 EOGTQ5NDL2 527 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 RSRC2Q7L4I2 434 aaKnown RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 MIB1Q86YT6 1006 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 FAM160A2Q8N612 972 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 NAT16Q8N8M0 369 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 UBA3Q8TBC4 463 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 FAM81BQ96LP2 452 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 IPO9Q96P70 1041 aaKnown RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 BBS2Q9BXC9 721 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 ULBP1Q9BZM6 244 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 CNGB3Q9NQW8 809 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 POLR3BQ9NW08 1133 aaPredicted RBP19.1■□□□□ 0.65
VCX3A-203ENST00000612369 RASAL2Q9UJF2 1139 aa19.1■□□□□ 0.65
VCX3A-203ENST00000612369 TULP2O00295 520 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 CACNG3O60359 315 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 TYRP14679 529 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 FOXK2Q01167 660 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 ADIGQ0VDE8 80 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 MESP2Q0VG99 397 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 EFEMP1Q12805 493 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 RRAGAQ7L523 313 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 TRMT11Q7Z4G4 463 aaKnown RBP19.09■□□□□ 0.65
VCX3A-203ENST00000612369 RASSF3Q86WH2 238 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 SIX6OS1Q8N1H7 587 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 TERB1Q8NA31 727 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 IL17RCQ8NAC3 791 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 RBBP8NLQ8NC74 664 aaPredicted RBP19.09■□□□□ 0.65
VCX3A-203ENST00000612369 SLC35F5Q8WV83 523 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 KAT5Q92993 513 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 ZC3H10Q96K80 434 aaKnown RBP19.09■□□□□ 0.65
VCX3A-203ENST00000612369 INTS2Q9H0H0 1204 aaKnown RBP19.09■□□□□ 0.65
VCX3A-203ENST00000612369 CLSTN2Q9H4D0 955 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 MARCH2Q9P0N8 246 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 USP18Q9UMW8 372 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.09■□□□□ 0.65
VCX3A-203ENST00000612369 STARD13Q9Y3M8 1113 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 DMXL1Q9Y485 3027 aa19.09■□□□□ 0.65
VCX3A-203ENST00000612369 NEDD8-MDP1E9PL57 170 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 RNF225M0QZC1 329 aaPredicted RBP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ALDH1A2O94788 518 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 TIE1P35590 1138 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ZNF132P52740 706 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 SPEM2Q0P670 501 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 PUM1Q14671 1186 aaKnown RBP eCLIP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 SMYD5Q6GMV2 418 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 GRAMD4Q6IC98 578 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 CLEC17AQ6ZS10 378 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 TPGS1Q6ZTW0 290 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ENOSF1Q7L5Y1 443 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ERMP1Q7Z2K6 904 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 C11orf74Q86VG3 221 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ARHGEF19Q8IW93 802 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 CCDC33Q8N5R6 958 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ALLCQ8N6M5 410 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 TXNDC5Q8NBS9 432 aaKnown RBP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 TFAP2BQ92481 460 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 CNOT6LQ96LI5 555 aaKnown RBP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 HSFY1Q96LI6 401 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 POLMQ9NP87 494 aaPredicted RBP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 ABCC13Q9NSE7 274 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 DNAJC17Q9NVM6 304 aaKnown RBP19.08■□□□□ 0.64
VCX3A-203ENST00000612369 CNTN6Q9UQ52 1028 aa19.08■□□□□ 0.64
VCX3A-203ENST00000612369 KLF8O95600 359 aaPredicted RBP19.07■□□□□ 0.64
VCX3A-203ENST00000612369 KLKB1P03952 638 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 CHRM1P11229 460 aaPredicted RBP19.07■□□□□ 0.64
VCX3A-203ENST00000612369 CSRP2Q16527 193 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 USP39Q53GS9 565 aaKnown RBP19.07■□□□□ 0.64
VCX3A-203ENST00000612369 C10orf76Q5T2E6 689 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 EMC10Q5UCC4 262 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 BHLHA9Q7RTU4 235 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 SFTPA1Q8IWL2 248 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 RNF139Q8WU17 664 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 IRGQQ8WZA9 623 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 PLD4Q96BZ4 506 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 RMDN1Q96DB5 314 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 KREMEN1Q96MU8 473 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 PARD6AQ9NPB6 346 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 DLL3Q9NYJ7 618 aa19.07■□□□□ 0.64
VCX3A-203ENST00000612369 SPAG17Q6Q759 2223 aa19.06■□□□□ 0.64
VCX3A-203ENST00000612369 SLC12A8A0AV02 714 aa19.06■□□□□ 0.64
VCX3A-203ENST00000612369 M0QYV0 167 aa19.06■□□□□ 0.64
VCX3A-203ENST00000612369 SGK1O00141 431 aa19.06■□□□□ 0.64
VCX3A-203ENST00000612369 CORO1AP31146 461 aaKnown RBP19.06■□□□□ 0.64
VCX3A-203ENST00000612369 DAOAP59103 153 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms