RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 CDK11BP21127 795 aaKnown RBP1.65□□□□□ -2.15
CEP290-208ENST00000604024 ADORA2AP29274 412 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 PHKA1P46020 1223 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 GUCY2FP51841 1108 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 PRKAG1P54619 331 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 ROR2Q01974 943 aaKnown RBP1.65□□□□□ -2.15
CEP290-208ENST00000604024 DLGAP5Q15398 846 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 SEC23BQ15437 767 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 CC2D1BQ5T0F9 858 aaKnown RBP1.65□□□□□ -2.15
CEP290-208ENST00000604024 SPATA2LQ8IUW3 424 aaPredicted RBP1.65□□□□□ -2.15
CEP290-208ENST00000604024 FAM47BQ8NA70 645 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 SLC25A28Q96A46 364 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 VPS50Q96JG6 964 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 BRINP2Q9C0B6 783 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 MS4A7Q9GZW8 240 aaPredicted RBP1.65□□□□□ -2.15
CEP290-208ENST00000604024 SMURF2Q9HAU4 748 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 CDY1Q9Y6F8 540 aa1.65□□□□□ -2.15
CEP290-208ENST00000604024 E2F8A0AVK6 867 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ISM1B1AKI9 464 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 KLKB1P03952 638 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 LCKP06239 509 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ARRB2P32121 409 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 POU5F1BQ06416 359 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 DNASE1L3Q13609 305 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 PTGR1Q14914 329 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 CNGA3Q16281 694 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 SLC4A8Q2Y0W8 1093 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ATAT1Q5SQI0 421 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 TTLL5Q6EMB2 1281 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 NADSYN1Q6IA69 706 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 OVCA2Q8WZ82 227 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 MIB2Q96AX9 1013 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 SLC35A4Q96G79 324 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HS6ST2Q96MM7 605 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 PIMREGQ9BSJ6 248 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 CDCP1Q9H5V8 836 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ANKRD6Q9Y2G4 727 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 MMP24Q9Y5R2 645 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 BTBD18B2RXH4 712 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 H3BML4 177 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ATG13O75143 517 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HOXB2P14652 356 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ANOS1P23352 680 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 P2RX3P56373 397 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HILS1P60008 231 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 GPC5P78333 572 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ARHGEF7Q14155 803 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 KCNJ12Q14500 433 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 ZNF585BQ52M93 769 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 EGFLAMQ63HQ2 1017 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HIST2H2BCQ6DN03 193 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 SLC39A5Q6ZMH5 540 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 SDR16C5Q8N3Y7 309 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 LPAR1Q92633 364 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HSPBAP1Q96EW2 488 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 MED30Q96HR3 178 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 MAP3K14Q99558 947 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 HTATIP2Q9BUP3 242 aa1.64□□□□□ -2.15
CEP290-208ENST00000604024 GATA5Q9BWX5 397 aaPredicted RBP1.64□□□□□ -2.15
CEP290-208ENST00000604024 PNMA8BQ9ULN7 279 aaPredicted RBP1.64□□□□□ -2.15
CEP290-208ENST00000604024 TNKSO95271 1327 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 WASHC2CQ9Y4E1 1318 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 TCF20Q9UGU0 1960 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 LOC102723971A0A1B0GUV8 181 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 hCG_1984214I3L0E3 225 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 CLIC1O00299 241 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 GLUD1P00367 558 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 PKMP14618 531 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 HSPA6P17066 643 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 MATN1P21941 496 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 GLUD2P49448 558 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 SHBQ15464 509 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 PLA1AQ53H76 456 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 RTL10Q7L3V2 364 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 MORC1Q86VD1 984 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 IPCEF1Q8WWN9 437 aaPredicted RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 NMD3Q96D46 503 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 TRMT61AQ96FX7 289 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 ZNF845Q96IR2 970 aaPredicted RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 CGRRF1Q99675 332 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 DCLK3Q9C098 648 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 MYLK2Q9H1R3 596 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 CDT1Q9H211 546 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 AGO4Q9HCK5 861 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 MRPS17Q9Y2R5 130 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.63□□□□□ -2.15
CEP290-208ENST00000604024 BTN3A1O00481 513 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 MDM4O15151 490 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 OFD1O75665 1012 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 U2AF1L5P0DN76 240 aaPredicted RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 RPL17P18621 184 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 MCM5P33992 734 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 RFX2P48378 723 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 GATMP50440 423 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 JAK3P52333 1124 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 SEC61A1P61619 476 aaKnown RBP1.63□□□□□ -2.15
CEP290-208ENST00000604024 U2AF1Q01081 240 aaKnown RBP eCLIP1.63□□□□□ -2.15
CEP290-208ENST00000604024 DDR1Q08345 913 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 CCDC15Q0P6D6 951 aa1.63□□□□□ -2.15
CEP290-208ENST00000604024 SLC14A1Q13336 389 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms