RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ZNF276Q8N554 614 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 CCDC26Q8TAB7 109 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 EDEM1Q92611 657 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 BHMTQ93088 406 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 FAM81BQ96LP2 452 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 TUBGCP2Q9BSJ2 902 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 ACP6Q9NPH0 428 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 ST7Q9NRC1 585 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 APEX2Q9UBZ4 518 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 VPS13AQ96RL7 3174 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
SREBF1-219ENST00000580540 GTPBP10A4D1E9 387 aaKnown RBP17.42■□□□□ 0.38
SREBF1-219ENST00000580540 ANTXRLA6NF34 631 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 YJEFN3A6XGL0 299 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-219ENST00000580540 E7ENQ6 273 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 K7EQS6 105 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 MED7O43513 233 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 GREM1O60565 184 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 LILRB5O75023 590 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 PAPSS2O95340 614 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-219ENST00000580540 GNA15P30679 374 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 MESP2Q0VG99 397 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 LPAL2Q16609 132 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 BSPRYQ5W0U4 402 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 DENND1BQ6P3S1 775 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 SASS6Q6UVJ0 657 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 LONP2Q86WA8 852 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 SFTPA1Q8IWL2 248 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 CCDC33Q8N5R6 958 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 SUMF1Q8NBK3 374 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 ACDQ96AP0 544 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 HHIPQ96QV1 700 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 BBS2Q9BXC9 721 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 MIS12Q9H081 205 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 NDST4Q9H3R1 872 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 CNGB3Q9NQW8 809 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 DEC1Q9P2X7 70 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 RAB23Q9ULC3 237 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 CNTN6Q9UQ52 1028 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 NFE2L3Q9Y4A8 694 aa17.42■□□□□ 0.38
SREBF1-219ENST00000580540 TBC1D3BA6NDS4 549 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 HOXC11O43248 304 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 TULP3O75386 442 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 CORO1AP31146 461 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 TIE1P35590 1138 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 GRIA2P42262 883 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DAOAP59103 153 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 SRSF5Q13243 272 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DMC1Q14565 340 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 CT47A1Q5JQC4 288 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 BHLHA9Q7RTU4 235 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DENND1CQ8IV53 801 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 FMNL3Q8IVF7 1028 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 ZNF606Q8WXB4 792 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 HSFY1Q96LI6 401 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DCLK3Q9C098 648 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 OLA1Q9NTK5 396 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 PLK2Q9NYY3 685 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 NCDNQ9UBB6 729 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 SFMBT1Q9UHJ3 866 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DNAJC12Q9UKB3 198 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 SMG5Q9UPR3 1016 aaKnown RBP17.41■□□□□ 0.38
SREBF1-219ENST00000580540 ZNF510Q9Y2H8 683 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 FAM186AA6NE01 2351 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 DMDP11532 3685 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 USP34Q70CQ2 3546 aa17.41■□□□□ 0.38
SREBF1-219ENST00000580540 TRIM24O15164 1050 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 HRO43593 1189 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 GABBR2O75899 941 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 MBD3O95983 291 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 KLKB1P03952 638 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 TYRP14679 529 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 SIM2Q14190 667 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-219ENST00000580540 TCP11X2Q5H9J9 407 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 Q6ZNB5 142 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 CEP68Q76N32 757 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 SYT13Q7L8C5 426 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 CLEC4CQ8WTT0 213 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 RUBCNQ92622 972 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 EPC1Q9H2F5 836 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 ZDHHC4Q9NPG8 344 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 ABCC13Q9NSE7 274 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 DNAJC17Q9NVM6 304 aaKnown RBP17.4■□□□□ 0.38
SREBF1-219ENST00000580540 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 WDR35Q9P2L0 1181 aa17.4■□□□□ 0.38
SREBF1-219ENST00000580540 BECN2A8MW95 431 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-219ENST00000580540 GPD2P43304 727 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 PREPLQ4J6C6 727 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-219ENST00000580540 MIIPQ5JXC2 388 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 GRAMD4Q6IC98 578 aa17.39■□□□□ 0.37
SREBF1-219ENST00000580540 RBM43Q6ZSC3 357 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms