RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GPD1P21695 349 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 DDX6P26196 483 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 KIF5AQ12840 1032 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 STXBP5Q5T5C0 1151 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 GPR158Q5T848 1215 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 TXNDC8Q6A555 127 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 MSANTD2Q6P1R3 559 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 KLHDC10Q6PID8 442 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 MAFAQ8NHW3 353 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 RNF139Q8WU17 664 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 RXFP2Q8WXD0 754 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 NECTIN4Q96NY8 510 aa16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 CDK5RAP1Q96SZ6 601 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-212ENST00000580061 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 COCHO43405 550 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 MBTPS2O43462 519 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 TBX18O95935 607 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 PDGFRAP16234 1089 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 ATP5C1P36542 298 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 HADHBP55084 474 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 OGDHQ02218 1023 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 SMAD4Q13485 552 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 CBX2Q14781 532 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 HS1BP3Q53T59 392 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 POTEHQ6S545 545 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 MAB21L3Q8N8X9 362 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 DQX1Q8TE96 717 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 FNIP1Q8TF40 1166 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 ING5Q8WYH8 240 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 NT5C3BQ969T7 300 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 SLC22A12Q96S37 553 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 NPY6RQ99463 290 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 SLC46A2Q9BY10 475 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 TRIM7Q9C029 511 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 RNF38Q9H0F5 515 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 POMKQ9H5K3 350 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 TASP1Q9H6P5 420 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 TRPC7Q9HCX4 862 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 RRN3Q9NYV6 651 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 ZMYM5Q9UJ78 669 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 ANAPC7Q9UJX3 599 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 STAP1Q9ULZ2 295 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 DUSP10Q9Y6W6 482 aa16.61■□□□□ 0.25
CSNK1D-212ENST00000580061 TRAV19A0A0A6YYK7 116 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 DPYSL4O14531 572 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 MDM4O15151 490 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 IGLV3-25P01717 112 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 HDCP19113 662 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 SDC4P31431 198 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 PTPN9P43378 593 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 PITX1P78337 314 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ZNF252P-AS1Q0IIN9 211 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 SLC25A52Q3SY17 297 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 CCDC14Q49A88 953 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 C10orf120Q5SQS8 335 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 OTUD1Q5VV17 481 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 NPAS3Q8IXF0 933 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ARL14EPQ8N8R7 260 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 FGF13Q92913 245 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 TRIM44Q96DX7 344 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 BTBD6Q96KE9 485 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 CYP2S1Q96SQ9 504 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ADAM33Q9BZ11 813 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 TRIM10Q9UDY6 481 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 SFMBT1Q9UHJ3 866 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
CSNK1D-212ENST00000580061 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 TFE3P19532 575 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 NOP2P46087 812 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 SULT1E1P49888 294 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 EFEMP1Q12805 493 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 C15orf59Q2T9L4 293 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 LEXMQ3ZCV2 418 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 BNIPLQ7Z465 357 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 TAC4Q86UU9 113 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 ADAM32Q8TC27 787 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 ZSWIM3Q96MP5 696 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 TBCBQ99426 244 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 NACA2Q9H009 215 aa16.59■□□□□ 0.25
CSNK1D-212ENST00000580061 MARCH2Q9P0N8 246 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms