RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	DUSP9	Q99956	384 aa	Known RBP	19.02	■□□□□ 0.64
DCAF11-238	ENST00000561375	GOLPH3L	Q9H4A5	285 aa		19.02	■□□□□ 0.64
DCAF11-238	ENST00000561375	TMEM74B	Q9NUR3	256 aa		19.02	■□□□□ 0.64
DCAF11-238	ENST00000561375	CALCOCO1	Q9P1Z2	691 aa		19.02	■□□□□ 0.64
DCAF11-238	ENST00000561375	NAGPA	Q9UK23	515 aa		19.02	■□□□□ 0.64
DCAF11-238	ENST00000561375	GON4L	Q3T8J9	2241 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	CDX4	O14627	284 aa	Predicted RBP	19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	MAPK13	O15264	365 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	CACNG3	O60359	315 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	CILP	O75339	1184 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	NTSR1	P30989	418 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	MAPK8	P45983	427 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	ZNF252P-AS1	Q0IIN9	211 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	PREPL	Q4J6C6	727 aa	Predicted RBP	19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	LYSMD4	Q5XG99	296 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	NUDT18	Q6ZVK8	323 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	CYP3A43	Q9HB55	503 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	FSCN3	Q9NQT6	498 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	PLK2	Q9NYY3	685 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	PCDHA5	Q9Y5H7	936 aa		19.01	■□□□□ 0.63
DCAF11-238	ENST00000561375	FRY	Q5TBA9	3013 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	ASCC3	Q8N3C0	2202 aa	Known RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	PRRT4	C9JH25	899 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	ITPKA	P23677	461 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	PSMC2	P35998	433 aa	Known RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	RPL6	Q02878	288 aa	Known RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	NFIL3	Q16649	462 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	KRBA2	Q6ZNG9	492 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	SMYD4	Q8IYR2	804 aa	Predicted RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	CHPF	Q8IZ52	775 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	XPO6	Q96QU8	1125 aa	Known RBP	19	■□□□□ 0.63
DCAF11-238	ENST00000561375	DNMT3L	Q9UJW3	386 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	RAD54B	Q9Y620	910 aa		19	■□□□□ 0.63
DCAF11-238	ENST00000561375	FAM237A	A0A1B0GTK4	181 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375		A0A1W2PQF6	199 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	CFI	P05156	583 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	KIF11	P52732	1056 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	SHC2	P98077	582 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	ADAM9	Q13443	819 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	BYSL	Q13895	437 aa	Known RBP	18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	KIAA1211L	Q6NV74	962 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375		Q6ZNB5	142 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	SCD5	Q86SK9	330 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	SYT12	Q8IV01	421 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	GUF1	Q8N442	669 aa	Known RBP	18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	CCDC150	Q8NCX0	1101 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	KCNV2	Q8TDN2	545 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	SEMA4D	Q92854	862 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	P2RY11	Q96G91	374 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	ARID3A	Q99856	593 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	NUSAP1	Q9BXS6	441 aa	Known RBP	18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	SLC6A17	Q9H1V8	727 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	TMEM8A	Q9HCN3	771 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	PNPLA8	Q9NP80	782 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	CACNA2D2	Q9NY47	1150 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	MARK1	Q9P0L2	795 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	WDR35	Q9P2L0	1181 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	EVL	Q9UI08	416 aa	Predicted RBP	18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	RASAL2	Q9UJF2	1139 aa		18.99	■□□□□ 0.63
DCAF11-238	ENST00000561375	STC2	O76061	302 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	HMBS	P08397	361 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	ENG	P17813	658 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	NDUFV2	P19404	249 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	RPL13	P26373	211 aa	Known RBP	18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	PLA2G4A	P47712	749 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	DGKG	P49619	791 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	FOXC1	Q12948	553 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	ZCWPW2	Q504Y3	356 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	SDE2	Q6IQ49	451 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	CCDC186	Q7Z3E2	898 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	DEFB124	Q8NES8	71 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	HEXIM2	Q96MH2	286 aa	Known RBP	18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	DUSP16	Q9BY84	665 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	GDPD2	Q9HCC8	539 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	CD93	Q9NPY3	652 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	CYP8B1	Q9UNU6	501 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	STARD13	Q9Y3M8	1113 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	CEP295	Q9C0D2	2601 aa		18.98	■□□□□ 0.63
DCAF11-238	ENST00000561375	PCDH15	Q96QU1	1955 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	AP5Z1	O43299	807 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	SPINK2	P20155	84 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	MXI1	P50539	228 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	EFEMP1	Q12805	493 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	LMAN2	Q12907	356 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	KRT39	Q6A163	491 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	KLHDC10	Q6PID8	442 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	IPO4	Q8TEX9	1081 aa	Known RBP	18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	PILRB	Q9UKJ0	227 aa		18.97	■□□□□ 0.63
DCAF11-238	ENST00000561375	IGHV1OR15-9	A0A0B4J2B8	117 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	WASH3P	C4AMC7	463 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	ZNF202	O95125	648 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	TOP3B	O95985	862 aa	Known RBP	18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	KLKB1	P03952	638 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	RALA	P11233	206 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	SLC4A11	Q8NBS3	891 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	GTPBP2	Q9BX10	602 aa	Known RBP	18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	DNAI2	Q9GZS0	605 aa		18.96	■□□□□ 0.63
DCAF11-238	ENST00000561375	CD248	Q9HCU0	757 aa		18.96	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms