RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FECHP22830 423 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 YWHAZP63104 245 aaKnown RBP22.68■■□□□ 1.22
SNX1-206ENST00000559389 ZXDBP98169 803 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 ZNF77Q15935 545 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 MCOLN2Q8IZK6 566 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 RNF139Q8WU17 664 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 KHSRPQ92945 711 aaKnown RBP eCLIP22.68■■□□□ 1.221e-7■□□□□ 8
SNX1-206ENST00000559389 UHRF1Q96T88 793 aaPredicted RBP22.68■■□□□ 1.22
SNX1-206ENST00000559389 RPP25Q9BUL9 199 aaKnown RBP22.68■■□□□ 1.22
SNX1-206ENST00000559389 RASAL2Q9UJF2 1139 aa22.68■■□□□ 1.22
SNX1-206ENST00000559389 SPTBN5Q9NRC6 3674 aaKnown RBP22.67■■□□□ 1.22
SNX1-206ENST00000559389 GOLGA8SH3BPF8 625 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 RTN2O75298 545 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 NCAM1P13591 858 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 EFEMP1Q12805 493 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 DDX42Q86XP3 938 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNX1-206ENST00000559389 SH3RF2Q8TEC5 729 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 DEPDC1BQ8WUY9 529 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 VCPIP1Q96JH7 1222 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 LRRC3BQ96PB8 259 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 KLF16Q9BXK1 252 aaPredicted RBP22.67■■□□□ 1.22
SNX1-206ENST00000559389 PLA2G2FQ9BZM2 168 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 ISCUQ9H1K1 167 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 SMOC2Q9H3U7 446 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 MARCH2Q9P0N8 246 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 NAALADL1Q9UQQ1 740 aa22.67■■□□□ 1.22
SNX1-206ENST00000559389 TCRBV5S1A1TA0A578 114 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 DPYSL4O14531 572 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 GRAP2O75791 330 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 SLC18A3Q16572 532 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 MIB1Q86YT6 1006 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 RNF135Q8IUD6 432 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 C3orf20Q8ND61 904 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 BPIFB1Q8TDL5 484 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 DQX1Q8TE96 717 aaKnown RBP22.66■■□□□ 1.22
SNX1-206ENST00000559389 DEF6Q9H4E7 631 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 NHEJ1Q9H9Q4 299 aaPredicted RBP22.66■■□□□ 1.22
SNX1-206ENST00000559389 METTL5Q9NRN9 209 aaKnown RBP22.66■■□□□ 1.22
SNX1-206ENST00000559389 TMEM59LQ9UK28 342 aa22.66■■□□□ 1.22
SNX1-206ENST00000559389 GOLGA6L6A8MZA4 724 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 LEFTY2O00292 366 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 CAPN9O14815 690 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 FTLP02792 175 aaPredicted RBP22.65■■□□□ 1.22
SNX1-206ENST00000559389 RRM1P23921 792 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 GFPT1Q06210 699 aaPredicted RBP22.65■■□□□ 1.22
SNX1-206ENST00000559389 FCHO2Q0JRZ9 810 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 GSE1Q14687 1217 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 MTF1Q14872 753 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 SYPL2Q5VXT5 272 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 ALKBH5Q6P6C2 394 aaKnown RBP22.65■■□□□ 1.22
SNX1-206ENST00000559389 ARCQ7LC44 396 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 DNAAF5Q86Y56 855 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 MFSD6LQ8IWD5 586 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 DEFB106AQ8N104 65 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 TRIM11Q96F44 468 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 CFAP97Q9P2B7 532 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 COL4A2P08572 1712 aa22.65■■□□□ 1.22
SNX1-206ENST00000559389 AKR1B10O60218 316 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 PSMC3P17980 439 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 FLT3P36888 993 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 GRM2Q14416 872 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 TRNP1Q6NT89 227 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 DNAJC24Q6P3W2 148 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 PHLDB2Q86SQ0 1253 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 TAC4Q86UU9 113 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 SLC44A3Q8N4M1 653 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 KIAA1958Q8N8K9 716 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 CCDC42Q96M95 316 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 SFMBT1Q9UHJ3 866 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 SORCS3Q9UPU3 1222 aa22.64■■□□□ 1.21
SNX1-206ENST00000559389 C5orf42Q9H799 3197 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 SLC12A8A0AV02 714 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 ATMINO43313 823 aaPredicted RBP22.63■■□□□ 1.21
SNX1-206ENST00000559389 MSI1O43347 362 aaKnown RBP22.63■■□□□ 1.21
SNX1-206ENST00000559389 IGLV3-25P01717 112 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 MATKP42679 507 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 PITX1P78337 314 aaPredicted RBP22.63■■□□□ 1.21
SNX1-206ENST00000559389 NNTQ13423 1086 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 TDGQ13569 410 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 DCAF6Q58WW2 860 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 CCDC122Q5T0U0 273 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 ZNF653Q96CK0 615 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 SERPINB11Q96P15 392 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 SELENOOQ9BVL4 669 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 GKN1Q9NS71 199 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 SPTLC3Q9NUV7 552 aa22.63■■□□□ 1.21
SNX1-206ENST00000559389 HBS1LQ9Y450 684 aaKnown RBP22.63■■□□□ 1.21
SNX1-206ENST00000559389 COL4A3Q01955 1670 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 IRAK2O43187 625 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 GREM1O60565 184 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 STC2O76061 302 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 GJB6O95452 261 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 IGLV3-27P01718 113 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 MYBL1P10243 752 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 IRF1P10914 325 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 NOS2P35228 1153 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 GSDMDP57764 484 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 COG7P83436 770 aa22.62■■□□□ 1.21
SNX1-206ENST00000559389 TRIP4Q15650 581 aaPredicted RBP22.62■■□□□ 1.21
SNX1-206ENST00000559389 PPP1R15BQ5SWA1 713 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms