RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, human

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf54-208	ENST00000530279	SVIP	Q8NHG7	77 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	SLC35G2	Q8TBE7	412 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	JADE3	Q92613	823 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	PMM1	Q92871	262 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	CUL5	Q93034	780 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	C1GALT1C1	Q96EU7	318 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	JAKMIP1	Q96N16	626 aa	Known RBP	4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	BBC3	Q96PG8	261 aa	Predicted RBP	4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	OR14A2	Q96R54	314 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	RMDN3	Q96TC7	470 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	SENP7	Q9BQF6	1050 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	PDCD2L	Q9BRP1	358 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	MYL10	Q9BUA6	226 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	RNF26	Q9BY78	433 aa	Predicted RBP	4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	C22orf23	Q9BZE7	217 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	UBA5	Q9GZZ9	404 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	QRSL1	Q9H0R6	528 aa	Known RBP	4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	POFUT1	Q9H488	388 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	XPNPEP3	Q9NQH7	507 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	SH3GLB2	Q9NR46	395 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	PARPBP	Q9NWS1	579 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	USP25	Q9UHP3	1055 aa		4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.38	□□□□□ -1.71
C11orf54-208	ENST00000530279	MKI67	P46013	3256 aa	Known RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PRPF3	O43395	683 aa	Known RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	AP1G1	O43747	822 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA12	O60330	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	NDUFS2	O75306	463 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PPFIA4	O75335	1185 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	MAF	O75444	373 aa	Predicted RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CDKL5	O76039	1030 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PRL	P01236	227 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	IFNAR1	P17181	557 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CAST	P20810	708 aa	Known RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	GNA11	P29992	359 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CCND2	P30279	289 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ICAM3	P32942	547 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CPT1A	P50416	773 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	METAP2	P50579	478 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CNTN2	Q02246	1040 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	GRIN1	Q05586	938 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	NEDD9	Q14511	834 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	MAN2A1	Q16706	1144 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	SLC35G1	Q2M3R5	365 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	UAP1L1	Q3KQV9	507 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ADCK5	Q3MIX3	580 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CT83	Q5H943	113 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ATAT1	Q5SQI0	421 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	TAPT1	Q6NXT6	567 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	KLHDC10	Q6PID8	442 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	NIPA1	Q7RTP0	329 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	KANSL1	Q7Z3B3	1105 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	MICU3	Q86XE3	530 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	GLB1L2	Q8IW92	636 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	SRBD1	Q8N5C6	995 aa	Known RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	CCDC148	Q8NFR7	591 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	BICD2	Q8TD16	824 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	LRGUK	Q96M69	825 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	GLT1D1	Q96MS3	346 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	INPP4A	Q96PE3	977 aa	Predicted RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PIGS	Q96S52	555 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ADI1	Q9BV57	179 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	BTBD2	Q9BX70	525 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ACE2	Q9BYF1	805 aa	Predicted RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	KRTAP1-5	Q9BYS1	174 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	WDR11	Q9BZH6	1224 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PSTPIP2	Q9H939	334 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	IFT122	Q9HBG6	1241 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	RIC8A	Q9NPQ8	531 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PXMP2	Q9NR77	195 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	GALNT8	Q9NY28	637 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	BARHL2	Q9NY43	387 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	KCMF1	Q9P0J7	381 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	FBXO10	Q9UK96	956 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	OAZ3	Q9UMX2	235 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	WASF3	Q9UPY6	502 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA8	Q9Y5G5	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA7	Q9Y5G6	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA6	Q9Y5G7	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA3	Q9Y5H0	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	PCDHGA2	Q9Y5H1	932 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	ASTN1	O14525	1302 aa		4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	COL11A1	P12107	1806 aa	Predicted RBP	4.37	□□□□□ -1.71
C11orf54-208	ENST00000530279	NCOR1	O75376	2440 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279		A0A0U1RQG5	324 aa	Predicted RBP	4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	KLF18	A0A0U1RQI7	1052 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	PRSS38	A1L453	326 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	FAM171A2	A8MVW0	826 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	FAM227A	F5H4B4	570 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279		H0Y858	1186 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	ACOT7	O00154	380 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	MEIS2	O14770	477 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	KIAA0355	O15063	1070 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	CTAGE5	O15320	804 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	CUTA	O60888	179 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	GH1	P01241	217 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	CYP3A4	P08684	503 aa		4.36	□□□□□ -1.71
C11orf54-208	ENST00000530279	POU2F2	P09086	479 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 94 ms