RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 NRDE2Q9H7Z3 1164 aa14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 ABCF3Q9NUQ8 709 aa14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 FETUBQ9UGM5 382 aa14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 AP4E1Q9UPM8 1137 aa14.31□□□□□ -0.12
LDLRAD3-202ENST00000524419 BCLAF3A2AJT9 711 aaKnown RBP14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM47DPA6NHR8 397 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 KRT15P19012 456 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 L1CAMP32004 1257 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 GJA9P57773 515 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 ELF3P78545 371 aaPredicted RBP14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 IL9RQ01113 521 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 GNASQ5JWF2 1037 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 GDAP1Q8TB36 358 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 ZFP42Q96MM3 310 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 DUSP16Q9BY84 665 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 USP29Q9HBJ7 922 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 MLXIPLQ9NP71 852 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 GTF2IRD1Q9UHL9 959 aa14.3□□□□□ -0.12
LDLRAD3-202ENST00000524419 DAB1O75553 588 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 PTPN1P18031 435 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 NRLP54845 237 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 ADIGQ0VDE8 80 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 CRHR2Q13324 411 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM133BQ5BKY9 247 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 PIGZQ86VD9 579 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 KCTD15Q96SI1 283 aaPredicted RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 MED10Q9BTT4 135 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 FRMD8Q9BZ67 464 aaPredicted RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 ACSS3Q9H6R3 686 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 RAB6BQ9NRW1 208 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SMG5Q9UPR3 1016 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 PRPF4O43172 522 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 UBOX5O94941 541 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 RARBP10826 455 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 CYBAP13498 195 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 NPR3P17342 541 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 RBL1P28749 1068 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SSTR1P30872 391 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 MATKP42679 507 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SULT1E1P49888 294 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 MTFR1Q15390 333 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 PKN2Q16513 984 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 WSCD1Q658N2 575 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 C4orf22Q6V702 233 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 C3orf62Q6ZUJ4 267 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 FBF1Q8TES7 1133 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM149B1Q96BN6 582 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 MRRFQ96E11 262 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 KLC2Q9H0B6 622 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 SPC25Q9HBM1 224 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM105AQ9NUU6 356 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 ST3GAL5Q9UNP4 418 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
LDLRAD3-202ENST00000524419 CTSHP09668 335 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 ACAT1P24752 427 aaKnown RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 MLH1P40692 756 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 NR2C2P49116 596 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 RIPK1Q13546 671 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 EFTUD2Q15029 972 aaKnown RBP eCLIP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 MDH1BQ5I0G3 518 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 RNF43Q68DV7 783 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 CXCL17Q6UXB2 119 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 CCDC91Q7Z6B0 441 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 CCDC185Q8N715 623 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 ADAM33Q9BZ11 813 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 UPF3AQ9H1J1 476 aaKnown RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 RXFP1Q9HBX9 757 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.28□□□□□ -0.12
LDLRAD3-202ENST00000524419 CLDN5O00501 218 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 SPAG7O75391 227 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 SPAG6O75602 509 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 FAM200BP0CF97 657 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 TAC1P20366 129 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 ELK3P41970 407 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 BNIP1Q12981 228 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 SLC25A52Q3SY17 297 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 SLC45A4Q5BKX6 768 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 DEFB106AQ8N104 65 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 SIX6OS1Q8N1H7 587 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 TMEM86AQ8N2M4 240 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 KCTD13Q8WZ19 329 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 534.3 ms