RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM227BQ96M60 508 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 TOX2Q96NM4 488 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 MED15Q96RN5 788 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 RMDN3Q96TC7 470 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PHF20Q9BVI0 1012 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 NUP58Q9BVL2 599 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CINPQ9BW66 212 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-216ENST00000523088 CARD6Q9BX69 1037 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 PACSIN1Q9BY11 444 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 TTYH3Q9C0H2 523 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 C2orf40Q9H1Z8 148 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SNX25Q9H3E2 840 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 KCNF1Q9H3M0 494 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 GID8Q9NWU2 228 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 NMRK1Q9NWW6 199 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 DTLQ9NZJ0 730 aa7.82□□□□□ -1.16
HDAC3-216ENST00000523088 SZT2Q5T011 3432 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 C15orf38-AP3S2A0A0A6YYH1 394 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 A0A0A6YYJ9 748 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 DPPA5A6NC42 116 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 DBX1A6NMT0 343 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 SLCO1B7G3V0H7 640 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 N4BP3O15049 544 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 PER2O15055 1255 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 EIF3HO15372 352 aaKnown RBP eCLIP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 MAGEB3O15480 346 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TXNL1O43396 289 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ATP9AO75110 1047 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 SASH3O75995 380 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 GOSR1O95249 250 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ASS1P00966 412 aaKnown RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 DNTTP04053 509 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 CLTBP09497 229 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 PSMA2P25787 234 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ADCYAP1R1P41586 468 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 SLC26A5P58743 744 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ASPRV1Q53RT3 343 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TTMPQ5BVD1 217 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 VARS2Q5ST30 1063 aaKnown RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 RAB12Q6IQ22 244 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TXNDC11Q6PKC3 985 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 PIK3AP1Q6ZUJ8 805 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ARMCX2Q7L311 632 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ANKRD33Q7Z3H0 272 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF589Q86UQ0 364 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TSPYL5Q86VY4 417 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 MAP7D3Q8IWC1 876 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 NATD1Q8N6N6 113 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 CCNYL1Q8N7R7 359 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 FAM133AQ8N9E0 248 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 PHOSPHO2Q8TCD6 241 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 FBXL18Q96ME1 805 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM68Q96MH6 324 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 NOX5Q96PH1 765 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 HINFPQ9BQA5 517 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM47Q9BQJ4 181 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 CENPKQ9BS16 269 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 CALN1Q9BXU9 219 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 GCOM2Q9BZD3 368 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 KLHL25Q9H0H3 589 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 UPF3AQ9H1J1 476 aaKnown RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 CARD9Q9H257 536 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 LIN28AQ9H9Z2 209 aaKnown RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 TIMMDC1Q9NPL8 285 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 IL17RBQ9NRM6 502 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-216ENST00000523088 HACD3Q9P035 362 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 ATP6V1HQ9UI12 483 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 SLC8A2Q9UPR5 921 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 INVSQ9Y283 1065 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 Q9Y3F1 56 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 RIPK3Q9Y572 518 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 LCTP09848 1927 aa7.81□□□□□ -1.16
HDAC3-216ENST00000523088 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 FAM237AA0A1B0GTK4 181 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 A0A1W2PQ45 241 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 A0A1W2PQY0 241 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ARHGEF37A1IGU5 675 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 DCDC2CA8MYV0 355 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 H7C0S8 307 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 AREL1O15033 823 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 SLC22A1O15245 554 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 SLC22A3O75751 556 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 FAM13AO94988 1023 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 CCNDBP1O95273 360 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ANP32DO95626 131 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 SNAI1O95863 264 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ASLP04424 464 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 CYP11A1P05108 521 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 SNHG28P0DPA3 235 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 GHRP10912 638 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PDHBP11177 359 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ANXA8P13928 327 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 HSD3B1P14060 373 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ALOX12P18054 663 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms