RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ERCC6LQ2NKX8 1250 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 RAP1GAP2Q684P5 730 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 MRPL10Q7Z7H8 261 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 MFN1Q8IWA4 741 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TTC8Q8TAM2 541 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PPP1R10Q96QC0 940 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 GPR62Q9BZJ7 368 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 HAPLN2Q9GZV7 340 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 GRXCR1A8MXD5 290 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PHOSPHO2Q8TCD6 241 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PLEKHO2Q8TD55 490 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 LHX5Q9H2C1 402 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 CFAP97Q9P2B7 532 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 SNX12Q9UMY4 172 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 SNX24Q9Y343 169 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PTPRJQ12913 1337 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 SBF1O95248 1867 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 GRID2IPA4D2P6 1211 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PIRO00625 290 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 POLR3GO15318 223 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 RFC1P35251 1148 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ARSEP51690 589 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 DNAJC21Q5F1R6 531 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 HDXQ7Z353 690 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 CELF6Q96J87 481 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 FAM124BQ9H5Z6 455 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 AVENQ9NQS1 362 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 SIX4Q9UIU6 781 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 COQ4Q9Y3A0 265 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ATAD5Q96QE3 1844 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 A0A0A6YYK5 440 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 MDM4O15151 490 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 HCRTO43612 131 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF189O75820 626 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 GJB5O95377 273 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PROZP22891 400 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PREPLQ4J6C6 727 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 FAM26DQ5JW98 314 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF449Q6P9G9 518 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PCGF5Q86SE9 256 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 PHF13Q86YI8 300 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TFB1MQ8WVM0 346 aaKnown RBP9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TFAP2BQ92481 460 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TOP1MTQ969P6 601 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 ERLEC1Q96DZ1 483 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 LACRTQ9GZZ8 138 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 GDAP2Q9NXN4 497 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 YIPF1Q9Y548 306 aa9.81□□□□□ -0.84
GAPVD1-219ENST00000495955 TBC1D3BA6NDS4 549 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 NOL4O94818 638 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 MIPP30301 263 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 LRPAP1P30533 357 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CTNNA1P35221 906 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 MEA1Q16626 185 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PMF1Q6P1K2 205 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 IRF2BP2Q7Z5L9 587 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 UBE2Q2Q8WVN8 375 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CASP10Q92851 521 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CPXM1Q96SM3 734 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TBCBQ99426 244 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 BRD9Q9H8M2 597 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CYP4F8P98187 520 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TFDP3Q5H9I0 405 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RRAGDQ9NQL2 400 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TRIM43BA6NCK2 446 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 C3orf70A6NLC5 250 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PTGESO14684 152 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PAMP19021 973 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CHKAP35790 457 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 BYSLQ13895 437 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 GEN1Q17RS7 908 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CENPUQ71F23 418 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TRIM43Q96BQ3 446 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CCDC195A0A1B0GUA6 201 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PRR23AA6NEV1 266 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 KIAA0355O15063 1070 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 MSI1O43347 362 aaKnown RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RAMP2O60895 175 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 DAB1O75553 588 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RBP3P10745 1247 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 ZNF143P52747 638 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PTPN20Q4JDL3 420 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 OSTM1Q86WC4 334 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 ATL2Q8NHH9 583 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 FAXDC2Q96IV6 333 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 SUDS3Q9H7L9 328 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 ATP13A1Q9HD20 1204 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 CAPN6Q9Y6Q1 641 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TCHHQ07283 1943 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 POC1B-GALNT4F8VUJ3 575 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 PPARGP37231 505 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 MATKP42679 507 aa9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 TSTA3Q13630 321 aaPredicted RBP9.8□□□□□ -0.84
GAPVD1-219ENST00000495955 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms