RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HTR3DQ70Z44 454 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 ERICH1Q86X53 443 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 FMNL3Q8IVF7 1028 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 ADGRG2Q8IZP9 1017 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 CPLX3Q8WVH0 158 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 FAM149B1Q96BN6 582 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 IQCDQ96DY2 449 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SYNCQ9H7C4 482 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 MARCH2Q9P0N8 246 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 SFMBT1Q9UHJ3 866 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 STRIP2Q9ULQ0 834 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 CAPN11Q9UMQ6 739 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 NAALADL1Q9UQQ1 740 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
COL1A1-208ENST00000494334 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SLC12A8A0AV02 714 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 STC2O76061 302 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 GYPCP04921 128 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 NCAM1P13591 858 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SOX9P48436 509 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 MLLT6P55198 1093 aaPredicted RBP14.16□□□□□ -0.14
COL1A1-208ENST00000494334 YWHAZP63104 245 aaKnown RBP14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SLC6A3Q01959 620 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 GOLGA8FQ08AF8 430 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 GOLGA8DPQ0D2H9 430 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 ASIC2Q16515 512 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 ITPRIPL2Q3MIP1 535 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 C2CD6Q53TS8 623 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 EFHC1Q5JVL4 640 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SYPL2Q5VXT5 272 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 MSANTD2Q6P1R3 559 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SARM1Q6SZW1 724 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 OLFML1Q6UWY5 402 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 TRIM72Q6ZMU5 477 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 TPRG1Q6ZUI0 275 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 BEND5Q7L4P6 421 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 ZDHHC17Q8IUH5 632 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 C18orf8Q96DM3 657 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SHDQ96IW2 340 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SYT11Q9BT88 431 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 LRFN3Q9BTN0 628 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
COL1A1-208ENST00000494334 MFSD1Q9H3U5 465 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 HAUS4Q9H6D7 363 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 ECT2Q9H8V3 914 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 POPDC2Q9HBU9 364 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 TBC1D14Q9P2M4 693 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL1A1-208ENST00000494334 PIAS3Q9Y6X2 628 aa14.16□□□□□ -0.14
COL1A1-208ENST00000494334 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 CAPN9O14815 690 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 GLI1P08151 1106 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 HMBSP08397 361 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 GLULP15104 373 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 CD72P21854 359 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 CASP14P31944 242 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 PRKCIP41743 596 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 KPNA1P52294 538 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 ZBED6P86452 979 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 CLEC16AQ2KHT3 1053 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 CWF19L1Q69YN2 538 aaKnown RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 SPECC1LQ69YQ0 1117 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 Q6ZNB5 142 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 XYLT1Q86Y38 959 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 BBS7Q8IWZ6 715 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 ZNF397Q8NF99 534 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 FLCNQ8NFG4 579 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 SLC30A5Q8TAD4 765 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 ATP2A3Q93084 1043 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 NUCKS1Q9H1E3 243 aaKnown RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 C8orf33Q9H7E9 229 aaPredicted RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 TBC1D17Q9HA65 648 aa14.15□□□□□ -0.14
COL1A1-208ENST00000494334 SEPT11Q9NVA2 429 aaKnown RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 LSM7Q9UK45 103 aaKnown RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 LUC7L2Q9Y383 392 aaKnown RBP14.15□□□□□ -0.14
COL1A1-208ENST00000494334 KANSL1LA0AUZ9 987 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 SPECC1L-ADORA2AF8WAN1 911 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 STK25O00506 426 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 MAN2B1O00754 1011 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 MSI1O43347 362 aaKnown RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 GRAP2O75791 330 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 NFATC1O95644 943 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 KLKB1P03952 638 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 SKILP12757 684 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 TNFAIP3P21580 790 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 MMP8P22894 467 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 CENPCQ03188 943 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 KLHL30Q0D2K2 578 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 DHCR24Q15392 516 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 TRIP4Q15650 581 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 RHBDF2Q6PJF5 856 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 ZNF852Q6ZMS4 543 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 TOGARAM2Q6ZUX3 1019 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 SLC26A9Q7LBE3 791 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 ZNF571Q7Z3V5 609 aaPredicted RBP14.14□□□□□ -0.15
COL1A1-208ENST00000494334 DEFB106AQ8N104 65 aa14.14□□□□□ -0.15
COL1A1-208ENST00000494334 CPA6Q8N4T0 437 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms