RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RRAGAQ7L523 313 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 GALNT15Q8N3T1 639 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 FAM71DQ8N9W8 422 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 RP9Q8TA86 221 aaKnown RBP4.56□□□□□ -1.68
CLK1-213ENST00000492793 HMGB4Q8WW32 186 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 SLC9A6Q92581 669 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 TBC1D20Q96BZ9 403 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 RTKNQ9BST9 563 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 TMEM120AQ9BXJ8 343 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
CLK1-213ENST00000492793 MLXIPQ9HAP2 919 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 SEPSECSQ9HD40 501 aaKnown RBP4.56□□□□□ -1.68
CLK1-213ENST00000492793 TRIM36Q9NQ86 728 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 FSCN3Q9NQT6 498 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 SERTAD4Q9NUC0 356 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 FBXO28Q9NVF7 368 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 DLL3Q9NYJ7 618 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 TFCP2L1Q9NZI6 479 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 LUZP4Q9P127 313 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 ASAP1Q9ULH1 1129 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 ADAMTS5Q9UNA0 930 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 PCDHB2Q9Y5E7 798 aa4.56□□□□□ -1.68
CLK1-213ENST00000492793 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 A8MVJ9 347 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 IPO5O00410 1097 aaKnown RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 SPRY2O43597 315 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 TMPRSS11DO60235 418 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 TAF5LO75529 589 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 CER1O95813 267 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 FSHBP01225 129 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 GCP02774 474 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 DHRS4L1P0CG22 281 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 JUPP14923 745 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 FPR3P25089 353 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 ADRA1DP25100 572 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 CCT5P48643 541 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 DEUP1Q05D60 604 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 FHL3Q13643 280 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 FHL2Q14192 279 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 ZNF169Q14929 603 aaPredicted RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 ACOX1Q15067 660 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 TRIM71Q2Q1W2 868 aaKnown RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 LIN54Q6MZP7 749 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 CCDC144NLQ6NUI1 221 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 ANKRD16Q6P6B7 361 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 KIRREL2Q6UWL6 708 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 SLC29A4Q7RTT9 530 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 GRASPQ7Z6J2 395 aaPredicted RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 ULK2Q8IYT8 1036 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 CAGE1Q8TC20 777 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 GOLGA1Q92805 767 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 EID2BQ96D98 161 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 HS6ST2Q96MM7 605 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 LENG8Q96PV6 779 aaPredicted RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 TRAPPC9Q96Q05 1148 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 PRRX2Q99811 253 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 NUDT22Q9BRQ3 303 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 TP63Q9H3D4 680 aaPredicted RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 TAF1DQ9H5J8 278 aaPredicted RBP4.55□□□□□ -1.68
CLK1-213ENST00000492793 CCDC134Q9H6E4 229 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 CPNE5Q9HCH3 593 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 ITM2CQ9NQX7 267 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 IL17RBQ9NRM6 502 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 PCDHB7Q9Y5E2 793 aa4.55□□□□□ -1.68
CLK1-213ENST00000492793 OR2W5A6NFC9 320 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 KIF28PB7ZC32 967 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 GCOM1H8Y6P7 765 aaPredicted RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 SUV39H1O43463 412 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 RPP40O75818 363 aaKnown RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 KRT38O76015 456 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 FGAP02671 866 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 ALADP13716 330 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 MCM5P33992 734 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 GDF5P43026 501 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 MAPK9P45984 424 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 COPB1P53618 953 aaKnown RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 SIM1P81133 766 aaPredicted RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 ZXDAP98168 799 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 CCDC15Q0P6D6 951 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 FOXO1Q12778 655 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 MTAPQ13126 283 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 TAF12Q16514 161 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 GRHL2Q6ISB3 625 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 SERPINA13PQ6UXR4 307 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 RAB11FIP2Q7L804 512 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 ZNF804AQ7Z570 1209 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 GGNQ86UU5 652 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 SLC44A2Q8IWA5 706 aaPredicted RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 OR1N1Q8NGS0 311 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 SCAMP5Q8TAC9 235 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 SLC22A17Q8WUG5 538 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 AFG1LQ8WV93 481 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 REXO5Q96IC2 774 aaKnown RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 ZSCAN31Q96LW9 406 aaPredicted RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 WDR24Q96S15 920 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 CINPQ9BW66 212 aaPredicted RBP4.54□□□□□ -1.68
CLK1-213ENST00000492793 CIPCQ9C0C6 399 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 TOR3AQ9H497 397 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms