RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 CLIC5Q9NZA1 410 aa9.37□□□□□ -0.91
PGK1-205ENST00000491291 DNMT3BQ9UBC3 853 aaKnown RBP9.37□□□□□ -0.91
PGK1-205ENST00000491291 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
PGK1-205ENST00000491291 PRRC2BQ5JSZ5 2229 aaKnown RBP9.37□□□□□ -0.91
PGK1-205ENST00000491291 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
PGK1-205ENST00000491291 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 M0QYT0 321 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 ZNF197O14709 1029 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 SPOPO43791 374 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 TLR5O60602 858 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 PAPLNO95428 1278 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 HOXB8P17481 243 aaPredicted RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 COMTP21964 271 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 GBP1P32455 592 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 MAN1A1P33908 653 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 RDXP35241 583 aaKnown RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 SLC1A1P43005 524 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 TUBP50607 506 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 EPHA5P54756 1037 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 CYP4F8P98187 520 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 ACAP1Q15027 740 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 SLC25A52Q3SY17 297 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 ARHGAP15Q53QZ3 475 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 C10orf120Q5SQS8 335 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 MSANTD2Q6P1R3 559 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 SYCE2Q6PIF2 218 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 Q7L0L9 218 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 GRASPQ7Z6J2 395 aaPredicted RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 TMEM150AQ86TG1 271 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 NIPA2Q8N8Q9 360 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 LRRC57Q8N9N7 239 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 FAM172AQ8WUF8 416 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 MYLIPQ8WY64 445 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 TBCBQ99426 244 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 NPY6RQ99463 290 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 CDX2Q99626 313 aaPredicted RBP9.36□□□□□ -0.91
PGK1-205ENST00000491291 NCAPGQ9BPX3 1015 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 NACA2Q9H009 215 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 ATXN3LQ9H3M9 355 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 CCSER2Q9H7U1 834 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 TRPC7Q9HCX4 862 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.36□□□□□ -0.91
PGK1-205ENST00000491291 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 SFMBT1Q9UHJ3 866 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 NUDT5Q9UKK9 219 aa9.36□□□□□ -0.91
PGK1-205ENST00000491291 CHD7Q9P2D1 2997 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 ESPNB1AK53 854 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 MDM4O15151 490 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 TBX10O75333 385 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 TRUB2O95900 331 aaKnown RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 FTCDO95954 541 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 F9P00740 461 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 FOSL2P15408 326 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 GJA1P17302 382 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 TFE3P19532 575 aaPredicted RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 ATP5C1P36542 298 aaKnown RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 GNG11P61952 73 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 PITX1P78337 314 aaPredicted RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 NTHL1P78549 312 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 DEUP1Q05D60 604 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 EFEMP1Q12805 493 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 NME3Q13232 169 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 HADHQ16836 314 aaKnown RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 GPR158Q5T848 1215 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 CES5AQ6NT32 575 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 CC2D1AQ6P1N0 951 aaPredicted RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.914e-11■■□□□ 12.2
PGK1-205ENST00000491291 STRADAQ7RTN6 431 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 PEX26Q7Z412 305 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 SLFN11Q7Z7L1 901 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 GPR149Q86SP6 731 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 SLC35F6Q8N357 371 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 ZNF276Q8N554 614 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 DEFB123Q8N688 67 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 SHKBP1Q8TBC3 707 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 NT5C3BQ969T7 300 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 SERPINB11Q96P15 392 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 SMOC2Q9H3U7 446 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 DDIT4Q9NX09 232 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 MARCH2Q9P0N8 246 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 CLEC1BQ9P126 229 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 AMFRQ9UKV5 643 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 MRPS23Q9Y3D9 190 aaKnown RBP9.35□□□□□ -0.91
PGK1-205ENST00000491291 HYOU1Q9Y4L1 999 aa9.35□□□□□ -0.91
PGK1-205ENST00000491291 ALG6Q9Y672 507 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms