RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 CAVIN1Q6NZI2 390 aaKnown RBP13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 PKN3Q6P5Z2 889 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 BHLHA9Q7RTU4 235 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 CLEC4CQ8WTT0 213 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 ZNF606Q8WXB4 792 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 GOLGA1Q92805 767 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 BHMTQ93088 406 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 MIS12Q9H081 205 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 VPS16Q9H269 839 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 ZSCAN32Q9NX65 697 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 AJAP1Q9UKB5 411 aaPredicted RBP13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 PCDHGA2Q9Y5H1 932 aa13.22□□□□□ -0.29
PPP1R3F-204ENST00000471261 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 ATG13O75143 517 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 STC2O76061 302 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 GPD2P43304 727 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 DAOAP59103 153 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 MYL5Q02045 173 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 KRT31Q15323 416 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 CDKAL1Q5VV42 579 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 ASCL5Q7RTU5 278 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 SCUBE3Q8IX30 993 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 ZNF276Q8N554 614 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 SHC3Q92529 594 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 HSFY1Q96LI6 401 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 PNKPQ96T60 521 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 OLA1Q9NTK5 396 aaKnown RBP13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 SFMBT1Q9UHJ3 866 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 SLC8A2Q9UPR5 921 aa13.21□□□□□ -0.29
PPP1R3F-204ENST00000471261 WDR87Q6ZQQ6 2873 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 PRR23AA6NEV1 266 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FOXN3O00409 490 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 GABBR2O75899 941 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FBXO21O94952 628 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 KAT7O95251 611 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 APODP05090 189 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 ACADSBP45954 432 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 PTK2Q05397 1052 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 KCNMA1Q12791 1236 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 C2orf27AQ580R0 203 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 DENND1CQ8IV53 801 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 PASD1Q8IV76 773 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 SFTPA1Q8IWL2 248 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 ANKRD20A12PQ8NF67 263 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 IRGQQ8WZA9 623 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FAM149B1Q96BN6 582 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FAM126AQ9BYI3 521 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 POLR3BQ9NW08 1133 aaPredicted RBP13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
PPP1R3F-204ENST00000471261 FRYLO94915 3013 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 CHURC1-FNTBB4DL54 471 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 K7EQS6 105 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 HOXC11O43248 304 aaPredicted RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 MSI1O43347 362 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 TULP3O75386 442 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 LTFP02788 710 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 KLKB1P03952 638 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 TDGF1P13385 188 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 NCAM1P13591 858 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 TYRP14679 529 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 HOXC13P31276 330 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 KRT9P35527 623 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 EIF2DP41214 584 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 GRIA2P42262 883 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 FNTBP49356 437 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 HARS2P49590 506 aaKnown RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 DMWDQ09019 674 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 Q6ZNB5 142 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 SLC47A2Q86VL8 602 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 SCML4Q8N228 414 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
PPP1R3F-204ENST00000471261 PLD4Q96BZ4 506 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms