RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TCP11X1B4DZS4 312 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 CLDN5O00501 218 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 ACKR2O00590 384 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 MAP3K7O43318 606 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 TIMM44O43615 452 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 F7P08709 466 aaPredicted RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 HOXA7P31268 230 aaPredicted RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 STXBP5LQ9Y2K9 1186 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 BRAFP15056 766 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
USP11-206ENST00000469080 OGDHQ02218 1023 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 FAM131BQ86XD5 332 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 BHMTQ93088 406 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 TUBGCP5Q96RT8 1024 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 CCDC77Q9BR77 488 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
USP11-206ENST00000469080 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 RASA4BC9J798 803 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 RASA4O43374 803 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 HSPA8P11142 646 aaKnown RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 IDO1P14902 403 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 BCAR1P56945 870 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 KPNB1Q14974 876 aaKnown RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 NTPCRQ9BSD7 190 aaKnown RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 C2orf40Q9H1Z8 148 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 KLHL14Q9P2G3 628 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SCINQ9Y6U3 715 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 PODXLO00592 558 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 CXCL11O14625 94 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 OXSR1O95747 527 aaPredicted RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 EPHB2P29323 1055 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 ARFIP2P53365 341 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 PAF1Q8N7H5 531 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 IP6K2Q9UHH9 426 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 GON4LQ3T8J9 2241 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 NFASCO94856 1347 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 CASTOR2A6NHX0 329 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 TREHO43280 583 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 OR6B1O95007 311 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 RBP3P10745 1247 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SSTR1P30872 391 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 PTPN11Q06124 597 aaPredicted RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 ACVR2BQ13705 512 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 ENOSF1Q7L5Y1 443 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 RXFP2Q8WXD0 754 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 UTP4Q969X6 686 aaKnown RBP12.78□□□□□ -0.36
USP11-206ENST00000469080 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SIK2Q9H0K1 926 aa12.78□□□□□ -0.36
USP11-206ENST00000469080 SPECC1L-ADORA2AF8WAN1 911 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 AVILO75366 819 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 ASS1P00966 412 aaKnown RBP12.77□□□□□ -0.36
USP11-206ENST00000469080 APRTP07741 180 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 TGFB3P10600 412 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 P4HA1P13674 534 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 SMPD1P17405 629 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 RXRGP48443 463 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 LRP8Q14114 963 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 FXNQ16595 210 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 MARK2Q7KZI7 788 aaKnown RBP12.77□□□□□ -0.36
USP11-206ENST00000469080 TXLNGQ9NUQ3 528 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 DKK3Q9UBP4 350 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 TIMM22Q9Y584 194 aa12.77□□□□□ -0.36
USP11-206ENST00000469080 NCANO14594 1321 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 MICAL2O94851 1124 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.37
USP11-206ENST00000469080 ITIH3Q06033 890 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 DCTN2Q13561 401 aaKnown RBP12.77□□□□□ -0.37
USP11-206ENST00000469080 LAMC2Q13753 1193 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 SLFN11Q7Z7L1 901 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 SNF8Q96H20 258 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 SDCBP2Q9H190 292 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 DCLRE1BQ9H816 532 aa12.77□□□□□ -0.37
USP11-206ENST00000469080 ARL2BPQ9Y2Y0 163 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms