RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 BHLHA9Q7RTU4 235 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 CCDC33Q8N5R6 958 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 FAM160A2Q8N612 972 aaPredicted RBP19.86■□□□□ 0.77
COL5A1-203ENST00000460264 NAT16Q8N8M0 369 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 UBA3Q8TBC4 463 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 MED15Q96RN5 788 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 ZSWIM1Q9BR11 485 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 LRRC4Q9HBW1 653 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 MARK1Q9P0L2 795 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 DEC1Q9P2X7 70 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 EBF1Q9UH73 591 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 RASAL2Q9UJF2 1139 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 CACNA1AO00555 2505 aa19.86■□□□□ 0.77
COL5A1-203ENST00000460264 NEDD8-MDP1E9PL57 170 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 RNF225M0QZC1 329 aaPredicted RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 CACNG3O60359 315 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 ANP32AP39687 249 aaKnown RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 TNFRSF4P43489 277 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 KIR2DL1P43626 348 aaPredicted RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 ZNF132P52740 706 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 EFEMP1Q12805 493 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 RSRC2Q7L4I2 434 aaKnown RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 ALLCQ8N6M5 410 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 IL17RCQ8NAC3 791 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 RBBP8NLQ8NC74 664 aaPredicted RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 EHBP1Q8NDI1 1231 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 TSTD1Q8NFU3 115 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 NDRG1Q92597 394 aaKnown RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 RMDN1Q96DB5 314 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 KREMEN1Q96MU8 473 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 BBS2Q9BXC9 721 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 INTS2Q9H0H0 1204 aaKnown RBP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 MARCH2Q9P0N8 246 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 USP18Q9UMW8 372 aa19.85■□□□□ 0.77
COL5A1-203ENST00000460264 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL5A1-203ENST00000460264 SDK1Q7Z5N4 2213 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 LRP3O75074 770 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 KLKB1P03952 638 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TYRP14679 529 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 BRD2P25440 801 aaKnown RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TIE1P35590 1138 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 COG7P83436 770 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 SPEM2Q0P670 501 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 HSF5Q4G112 596 aaPredicted RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 PREPLQ4J6C6 727 aaPredicted RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 EMC10Q5UCC4 262 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TPGS1Q6ZTW0 290 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TERB1Q8NA31 727 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TXNDC5Q8NBS9 432 aaKnown RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 KCTD13Q8WZ19 329 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 CNOT6LQ96LI5 555 aaKnown RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 IPO9Q96P70 1041 aaKnown RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 CLSTN2Q9H4D0 955 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 DNAJC17Q9NVM6 304 aaKnown RBP19.84■□□□□ 0.77
COL5A1-203ENST00000460264 WDR35Q9P2L0 1181 aa19.84■□□□□ 0.77
COL5A1-203ENST00000460264 TBC1D3BA6NDS4 549 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 TRIM24O15164 1050 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 KLF8O95600 359 aaPredicted RBP19.83■□□□□ 0.77
COL5A1-203ENST00000460264 CALCAP01258 141 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 HNRNPLP14866 589 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL5A1-203ENST00000460264 LMNB2Q03252 620 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 CRY1Q16526 586 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 GRAMD4Q6IC98 578 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 CACNA2D4Q7Z3S7 1137 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 KBTBD6Q86V97 674 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 RASSF3Q86WH2 238 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 SIX6OS1Q8N1H7 587 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 MLKLQ8NB16 471 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 STRIP2Q9ULQ0 834 aa19.83■□□□□ 0.77
COL5A1-203ENST00000460264 PLXND1Q9Y4D7 1925 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 YJEFN3A6XGL0 299 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 E7ENQ6 273 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 M0QYV0 167 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 SGK1O00141 431 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 HMBSP08397 361 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 CORO1AP31146 461 aaKnown RBP19.82■□□□□ 0.76
COL5A1-203ENST00000460264 DGKEP52429 567 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 STILQ15468 1287 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 CNGA2Q16280 664 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 C10orf76Q5T2E6 689 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 ANO7Q6IWH7 933 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 PMF1Q6P1K2 205 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 TMEM92Q6UXU6 159 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 IRF2BP1Q8IU81 584 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 SCML4Q8N228 414 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 SLC35F5Q8WV83 523 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 P2RY11Q96G91 374 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 ZC3H10Q96K80 434 aaKnown RBP19.82■□□□□ 0.76
COL5A1-203ENST00000460264 XPO6Q96QU8 1125 aaKnown RBP19.82■□□□□ 0.76
COL5A1-203ENST00000460264 DCLK3Q9C098 648 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 ZDHHC4Q9NPG8 344 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 CNGB3Q9NQW8 809 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 OLA1Q9NTK5 396 aaKnown RBP19.82■□□□□ 0.76
COL5A1-203ENST00000460264 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 ZNF510Q9Y2H8 683 aa19.82■□□□□ 0.76
COL5A1-203ENST00000460264 SLC12A8A0AV02 714 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 ADAM23O75077 832 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 GABBR2O75899 941 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 LCP1P13796 627 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 RGS7P49802 495 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms