RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TMEM150AQ86TG1 271 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 TMC8Q8IU68 726 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 DQX1Q8TE96 717 aaKnown RBP22.01■■□□□ 1.11
VPS13B-204ENST00000441350 PGAP3Q96FM1 320 aaPredicted RBP22.01■■□□□ 1.11
VPS13B-204ENST00000441350 PRDM12Q9H4Q4 367 aa22.01■■□□□ 1.11
VPS13B-204ENST00000441350 MIF4GDA9UHW6 222 aaKnown RBP22■■□□□ 1.11
VPS13B-204ENST00000441350 M0QYT0 321 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 IGLV3-25P01717 112 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 F11P03951 625 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 RALAP11233 206 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 RARGP13631 454 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 TCF4P15884 667 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 DESP17661 470 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 CTNNA2P26232 953 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 GRIN2CQ14957 1233 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 RPS6KA1Q15418 735 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 PAPD7Q5XG87 772 aaKnown RBP22■■□□□ 1.11
VPS13B-204ENST00000441350 NCAPGQ9BPX3 1015 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 SMOC2Q9H3U7 446 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 TRPM5Q9NZQ8 1165 aa22■■□□□ 1.11
VPS13B-204ENST00000441350 SOX1O00570 391 aaPredicted RBP21.99■■□□□ 1.11
VPS13B-204ENST00000441350 TRUB2O95900 331 aaKnown RBP21.99■■□□□ 1.11
VPS13B-204ENST00000441350 MIPP30301 263 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 CTNNA1P35221 906 aaKnown RBP21.99■■□□□ 1.11
VPS13B-204ENST00000441350 SLC25A11Q02978 314 aaKnown RBP21.99■■□□□ 1.11
VPS13B-204ENST00000441350 HYAL1Q12794 435 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 EIF4EBP2Q13542 120 aaPredicted RBP21.99■■□□□ 1.11
VPS13B-204ENST00000441350 TCEAL5Q5H9L2 206 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 LRRC38Q5VT99 294 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 HS6ST3Q8IZP7 471 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 KIF18AQ8NI77 898 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 RNF139Q8WU17 664 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 KRT35Q92764 455 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 PCDHA3Q9Y5H8 950 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 ANAPC1Q9H1A4 1944 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 OBSL1O75147 1896 aa21.99■■□□□ 1.11
VPS13B-204ENST00000441350 CCDC66A2RUB6 948 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 DDX3YO15523 660 aaKnown RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 PEX5P50542 639 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 EPHA5P54756 1037 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 PABPC1LQ4VXU2 614 aaKnown RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 TMEM184AQ6ZMB5 413 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 TAC4Q86UU9 113 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 RHOT1Q8IXI2 618 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 ZNF592Q92610 1267 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 ZNF707Q96C28 371 aaPredicted RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 PRKD2Q9BZL6 878 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 NUDT5Q9UKK9 219 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 USP18Q9UMW8 372 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 PSTPIP1O43586 416 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 XYLBO75191 536 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 POU3F3P20264 500 aaPredicted RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 IL1R2P27930 398 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 MARCKSL1P49006 195 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 TUBP50607 506 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 ATXN1P54253 815 aaKnown RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 CYP4V2Q6ZWL3 525 aaPredicted RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 GAREM2Q75VX8 874 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 RSRC2Q7L4I2 434 aaKnown RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 EFHBQ8N7U6 833 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 ADAM32Q8TC27 787 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 CASP10Q92851 521 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 CORO1BQ9BR76 489 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 CCSER2Q9H7U1 834 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 OLA1Q9NTK5 396 aaKnown RBP21.98■■□□□ 1.11
VPS13B-204ENST00000441350 PIGVQ9NUD9 493 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 SNX12Q9UMY4 172 aa21.98■■□□□ 1.11
VPS13B-204ENST00000441350 DENND4CQ5VZ89 1909 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 CCDC195A0A1B0GUA6 201 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 TLR5O60602 858 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 F9P00740 461 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 PTPN2P17706 415 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 RDXP35241 583 aaKnown RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 SSR1P43307 286 aaKnown RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 AMPD2Q01433 879 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 DEUP1Q05D60 604 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 ZNF697Q5TEC3 545 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 TXNRD3NBQ6F5E7 133 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 POLNQ7Z5Q5 900 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 UBL4BQ8N7F7 174 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 CMASQ8NFW8 434 aaPredicted RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 ALG3Q92685 438 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 PEBP4Q96S96 227 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 CDK5RAP1Q96SZ6 601 aaKnown RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 IGFLR1Q9H665 355 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 FAM204AQ9H8W3 233 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 WDR6Q9NNW5 1121 aaKnown RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 RRAGDQ9NQL2 400 aaPredicted RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 ASAH2Q9NR71 780 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 DZANK1Q9NVP4 752 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 HCFC1R1Q9NWW0 138 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 DDIT4Q9NX09 232 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 DNMT3BQ9UBC3 853 aaKnown RBP21.97■■□□□ 1.11
VPS13B-204ENST00000441350 DOCK6Q96HP0 2047 aa21.97■■□□□ 1.11
VPS13B-204ENST00000441350 GLP2RO95838 553 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 TBX18O95935 607 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 PRLRP16471 622 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 GABRR2P28476 465 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 NME3Q13232 169 aa21.96■■□□□ 1.11
VPS13B-204ENST00000441350 HADHQ16836 314 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms