RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RRAGAQ7L523 313 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 ARHGAP18Q8N392 663 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 PPM1KQ8N3J5 372 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 C12orf50Q8NA57 414 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 IL17RCQ8NAC3 791 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 ERLEC1Q96DZ1 483 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 NT5C1BQ96P26 610 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 SRRTQ9BXP5 876 aaKnown RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 ULBP1Q9BZM6 244 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 DUSP15Q9H1R2 295 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 SMOC1Q9H4F8 434 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 PLK2Q9NYY3 685 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 CLIC5Q9NZA1 410 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 EBF1Q9UH73 591 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 TSPAN16Q9UKR8 245 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 STRIP2Q9ULQ0 834 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 USP3Q9Y6I4 520 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 NUP210Q8TEM1 1887 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 PTPRZ1P23471 2315 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 USP34Q70CQ2 3546 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 TULP2O00295 520 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 PIK3R2O00459 728 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ZBTB24O43167 697 aaPredicted RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 GREM1O60565 184 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 EPN2O95208 641 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ZBED1O96006 694 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 CALCAP01258 141 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 LCP1P13796 627 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 TYRP14679 529 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 HNRNPLP14866 589 aaKnown RBP eCLIP9.75□□□□□ -0.85
NUP50-206ENST00000422489 TBXAS1P24557 533 aaPredicted RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 KIR2DL1P43626 348 aaPredicted RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 COG7P83436 770 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 TTI2Q6NXR4 508 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 KLHDC10Q6PID8 442 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 TMEM270Q6UE05 265 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ETFBKMTQ8IXQ9 262 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ZNF513Q8N8E2 541 aaPredicted RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 RNF139Q8WU17 664 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 HMGB4Q8WW32 186 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 RLN3Q8WXF3 142 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 KAT5Q92993 513 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 LOXL4Q96JB6 756 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ZC3H10Q96K80 434 aaKnown RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 CDK5RAP1Q96SZ6 601 aaKnown RBP9.75□□□□□ -0.85
NUP50-206ENST00000422489 DCLK3Q9C098 648 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 MARCH2Q9P0N8 246 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 KIAA1257Q9ULG3 409 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 ZNF510Q9Y2H8 683 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 PATJQ8NI35 1801 aa9.75□□□□□ -0.85
NUP50-206ENST00000422489 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 MED19A0JLT2 244 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 RNF225M0QZC1 329 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 XPO1O14980 1071 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 FOXD2O60548 495 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 STC2O76061 302 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 KLKB1P03952 638 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 ZNF806P0C7X5 589 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 CORO1AP31146 461 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 DHPSP49366 369 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 DGKGP49619 791 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 RGS7P49802 495 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 BST2Q10589 180 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 KCNH2Q12809 1159 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 PAK1Q13153 545 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 HSF5Q4G112 596 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 RAB41Q5JT25 222 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 TRMT11Q7Z4G4 463 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 DENND1CQ8IV53 801 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 ARHGEF19Q8IW93 802 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 SIX6OS1Q8N1H7 587 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 TERB1Q8NA31 727 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 MDGA1Q8NFP4 955 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 NETO1Q8TDF5 533 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 EDEM1Q92611 657 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 CNOT6LQ96LI5 555 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 RTKNQ9BST9 563 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 FAM124BQ9H5Z6 455 aaPredicted RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 VPS45Q9NRW7 570 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 AGO1Q9UL18 857 aaKnown RBP9.74□□□□□ -0.85
NUP50-206ENST00000422489 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.74□□□□□ -0.85
NUP50-206ENST00000422489 F5P12259 2224 aa9.74□□□□□ -0.85
NUP50-206ENST00000422489 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 PRRT4C9JH25 899 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 O00370 1275 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 P4HA2O15460 535 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 TSPAN3O60637 253 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 ADAM23O75077 832 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 CAVIN2O95810 425 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 GNA14O95837 355 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 AFPP02771 609 aaKnown RBP9.73□□□□□ -0.85
NUP50-206ENST00000422489 CYBBP04839 570 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 PAEPP09466 180 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 CISD3P0C7P0 127 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 KRT5P13647 590 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 HOXB2P14652 356 aa9.73□□□□□ -0.85
NUP50-206ENST00000422489 BCKDHBP21953 392 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms