RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 MSTO1Q9BUK6 570 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 COPS7BQ9H9Q2 264 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 GPATCH2LQ9NWQ4 482 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 EXTL3O43909 919 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SUPT3HO75486 399 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SERPINB5P36952 375 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SLC1A6P48664 564 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 PDPK2PQ6A1A2 396 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 BBS12Q6ZW61 710 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 NCAPG2Q86XI2 1143 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 MPP5Q8N3R9 675 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 RAB3IL1Q8TBN0 382 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 PLEKHG4BQ96PX9 1271 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SIRPGQ9P1W8 387 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 NEMP1O14524 444 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 KRT38O76015 456 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 PENKP01210 267 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 MAP3K21Q5TCX8 1036 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 AMIGO2Q86SJ2 522 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 PRICKLE1Q96MT3 831 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 RNPEPQ9H4A4 650 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 THAP1Q9NVV9 213 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 KLF11O14901 512 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.351e-14■□□□□ 9.4
PKP4-204ENST00000421462 RAD17O75943 681 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 OSBPP22059 807 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 GRIA1P42261 906 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 PKNOX1P55347 436 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 OSTNP61366 133 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 C15orf39Q6ZRI6 1047 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 C4orf19Q8IY42 314 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 WDTC1Q8N5D0 677 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 LRGUKQ96M69 825 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 FOCADQ5VW36 1801 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 NFASCO94856 1347 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 NOP56O00567 594 aaKnown RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 TBC1D12O60347 775 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 ITGAXP20702 1163 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 RAP1GAPP47736 663 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 MYL6P60660 151 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 LRRC38Q5VT99 294 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 DENND1BQ6P3S1 775 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 CDAN1Q8IWY9 1227 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 ADGRF2Q8IZF7 708 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 ADAM32Q8TC27 787 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 PRMT6Q96LA8 375 aaPredicted RBP17.21■□□□□ 0.35
PKP4-204ENST00000421462 CCDC28BQ9BUN5 200 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 HAPLN2Q9GZV7 340 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 TBC1D22BQ9NU19 505 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.21■□□□□ 0.35
PKP4-204ENST00000421462 PTTG2Q9NZH5 202 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 AP4B1Q9Y6B7 739 aa17.21■□□□□ 0.35
PKP4-204ENST00000421462 NDC80O14777 642 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 CDK4P11802 303 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 MIPP30301 263 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 EML3Q32P44 896 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 PTPN20Q4JDL3 420 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 ANGEL2Q5VTE6 544 aaKnown RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 PTAR1Q7Z6K3 402 aaPredicted RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 MIPOL1Q8TD10 442 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 KRT7P08729 469 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 AOC1P19801 751 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 COL5A3P25940 1745 aaPredicted RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 NUDT2P50583 147 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 PRKG1Q13976 671 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 CYLC2Q14093 348 aaPredicted RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 PPP4R1Q8TF05 950 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 TFB1MQ8WVM0 346 aaKnown RBP17.2■□□□□ 0.34
PKP4-204ENST00000421462 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 ZNF358Q9NW07 568 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 TBC1D30Q9Y2I9 924 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 NRAPQ86VF7 1730 aa17.2■□□□□ 0.34
PKP4-204ENST00000421462 CRTAMO95727 393 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 IMPDH2P12268 514 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 RBL1P28749 1068 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 GRM2Q14416 872 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 PSMD6Q15008 389 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 NRF1Q16656 503 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 PPM1JQ5JR12 505 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 DUS1LQ6P1R4 473 aaKnown RBP17.19■□□□□ 0.34
PKP4-204ENST00000421462 UNC5AQ6ZN44 842 aa17.19■□□□□ 0.34
PKP4-204ENST00000421462 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms