RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PDGFCQ9NRA1 345 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 SNX15Q9NRS6 342 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 CDC23Q9UJX2 597 aa5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P49-201ENST00000418882 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 POC1B-GALNT4F8VUJ3 575 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 M0QZQ0 153 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 PODXLO00592 558 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 COQ9O75208 318 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 CD19P15391 556 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 SFPQP23246 707 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 IL6STP40189 918 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC10A2Q12908 348 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 GRM1Q13255 1194 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 ATP1A4Q13733 1029 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 LARS2Q15031 903 aaKnown RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 ST3GAL2Q16842 350 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 USP17L6PQ6QN14 398 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 SERPINA13PQ6UXR4 307 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 NOL8Q76FK4 1167 aaKnown RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 FAM186BQ8IYM0 893 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 GALNT4Q8N4A0 578 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 CCDC150Q8NCX0 1101 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 IPO4Q8TEX9 1081 aaKnown RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 PNISRQ8TF01 805 aaKnown RBP5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 ZNF566Q969W8 418 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 C5orf34Q96MH7 638 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 FLRT1Q9NZU1 646 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 IGSF9Q9P2J2 1179 aa5.25□□□□□ -1.57
HMGB1P49-201ENST00000418882 H3BNC9 293 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 PCDH17O14917 1159 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 PLA2G6O60733 806 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 HMGB1P09429 215 aaKnown RBP5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 EPHB2P29323 1055 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 GALNSP34059 522 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 RAE1P78406 368 aaKnown RBP5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 CFHR3Q02985 330 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC14A1Q13336 389 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 DNASE1L3Q13609 305 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 RAB30Q15771 203 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 MAPKAPK3Q16644 382 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMEM196Q5HYL7 178 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 FAM90A2PQ658T7 463 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 DCDC5Q6ZRR9 648 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 C12orf76Q8N812 135 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 ABHD5Q8WTS1 349 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 TNIP3Q96KP6 325 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 STK33Q9BYT3 514 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 USP29Q9HBJ7 922 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 GAR1Q9NY12 217 aaKnown RBP5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 KLHL13Q9P2N7 655 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 FZD4Q9ULV1 537 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 PCDHB2Q9Y5E7 798 aa5.24□□□□□ -1.57
HMGB1P49-201ENST00000418882 C16orf96A6NNT2 1141 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 FYB1O15117 783 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 CCNT2O60583 730 aaKnown RBP5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 GCATO75600 419 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 CHRM5P08912 532 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 DRD1P21728 446 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 PPM1AP35813 382 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 KCNJ12Q14500 433 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 MFSD13AQ14CX5 517 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 DGKKQ5KSL6 1271 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 PIK3AP1Q6ZUJ8 805 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 MORC1Q86VD1 984 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 ADAMTS18Q8TE60 1221 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 EFHD1Q9BUP0 239 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 NLRC4Q9NPP4 1024 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC52A1Q9NWF4 448 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 TFCP2L1Q9NZI6 479 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMOD4Q9NZQ9 345 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 SLC39A10Q9ULF5 831 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 DTNAQ9Y4J8 743 aa5.23□□□□□ -1.57
HMGB1P49-201ENST00000418882 DNAJC9-AS1A6NH13 148 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 AQP12BA6NM10 295 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 CLIC1O00299 241 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ZSCAN9O15535 394 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 IFIT2P09913 472 aaKnown RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMIGD3P0DMS9 266 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ALADP13716 330 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ABCG1P45844 678 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 TXNL4AP83876 142 aaKnown RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 UBE4AQ14139 1066 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 KCNB1Q14721 858 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 TMEM65Q6PI78 240 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 FBXO38Q6PIJ6 1188 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 YTHDF3Q7Z739 585 aaKnown RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 P3H2Q8IVL5 708 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ZNF398Q8TD17 642 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 VPS50Q96JG6 964 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 CCDC17Q96LX7 622 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 FYTTD1Q96QD9 318 aaKnown RBP5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ZCWPW1Q9H0M4 648 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 ZNF700Q9H0M5 742 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 NECTIN3Q9NQS3 549 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 SEMA5BQ9P283 1151 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 VPS4AQ9UN37 437 aa5.22□□□□□ -1.57
HMGB1P49-201ENST00000418882 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms