RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 PGBD2Q6P3X8 592 aa19■□□□□ 0.63
SHANK3-202ENST00000414786 RPTNQ6XPR3 784 aa19■□□□□ 0.63
SHANK3-202ENST00000414786 SETD4Q9NVD3 440 aa19■□□□□ 0.63
SHANK3-202ENST00000414786 MEI4A8MW99 385 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 OTUD3Q5T2D3 398 aaPredicted RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 MDM1Q8TC05 714 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 XPO6Q96QU8 1125 aaKnown RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 PAK5Q9P286 719 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 FAM187AA6NFU0 413 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ERMARDQ5T6L9 678 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ULK3Q6PHR2 472 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 KLHL23Q8NBE8 558 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ATG4AQ8WYN0 398 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 PRKD2Q9BZL6 878 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 SLC1A1P43005 524 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 C21orf59P57076 290 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 PRUNE1Q86TP1 453 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 RTL3Q8N8U3 475 aaKnown RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 GULP1Q9UBP9 304 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 TRIM49D1C9J1S8 452 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 RBP3P10745 1247 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 GTF2A2P52657 109 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 SETMARQ53H47 684 aaPredicted RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 CES3Q6UWW8 571 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ARRDC4Q8NCT1 418 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 SNTG2Q9NY99 539 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 HBP1O60381 514 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 PARP8Q8N3A8 854 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ZNF671Q8TAW3 534 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 CMTM5Q96DZ9 223 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 CATSPER2Q96P56 530 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 AGMOQ6ZNB7 445 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 NRSN1Q8IZ57 195 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 CYP4Z2PQ8N1L4 340 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 C2orf73Q8N5S3 287 aaPredicted RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 REXO5Q96IC2 774 aaKnown RBP18.99■□□□□ 0.63
SHANK3-202ENST00000414786 OSBPL8Q9BZF1 889 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 ZMYM4Q5VZL5 1548 aa18.99■□□□□ 0.63
SHANK3-202ENST00000414786 TRBV23OR9-2A0A075B6M9 112 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SAC3D1A6NKF1 404 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 HSD3B2P26439 372 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 KCTD14Q9BQ13 255 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 GSAPA4D1B5 854 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SNRPAP09012 282 aaKnown RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SPATA31D3P0C874 917 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 CDC42EP1Q00587 391 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SPATA31D4Q6ZUB0 917 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 FRMD5Q7Z6J6 570 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SP8Q8IXZ3 490 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 THP07101 528 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 TOB2Q14106 344 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 TRIM16LQ309B1 348 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ARID3BQ8IVW6 561 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ZNF354BQ96LW1 612 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 COQ7Q99807 217 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 OSBPL5Q9H0X9 879 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 AGPAT5Q9NUQ2 364 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 UVRAGQ9P2Y5 699 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ZW10O43264 779 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 MAP1SQ66K74 1059 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 OR10H2O60403 315 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ANXA9O76027 345 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PAICSP22234 425 aaKnown RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 RNASE12Q5GAN4 147 aaKnown RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ARMCX4Q5H9R4 360 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 STRA8Q7Z7C7 330 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 STX12Q86Y82 276 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 IRX2Q9BZI1 471 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SAE1Q9UBE0 346 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 JCHAINP01591 159 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PTPN1P18031 435 aaKnown RBP18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PPP2R1BP30154 601 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 GEMP55040 296 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 DNAJC3Q13217 504 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 ITGADQ13349 1161 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PLA2G4EQ3MJ16 856 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 PDGFCQ9NRA1 345 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 MAFFQ9ULX9 164 aa18.98■□□□□ 0.63
SHANK3-202ENST00000414786 SCN2BO60939 215 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 NFKB1P19838 968 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 SERPINH1P50454 418 aaKnown RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 AMPD2Q01433 879 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 CHRNB3Q05901 458 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 LY6KQ17RY6 165 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 PDZK1Q5T2W1 519 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 TAF8Q7Z7C8 310 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 TMEM159Q96B96 161 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 FAM120BQ96EK7 910 aaKnown RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 FAM84BQ96KN1 310 aaPredicted RBP18.97■□□□□ 0.63
SHANK3-202ENST00000414786 ARMC7Q9H6L4 198 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 GLP2RO95838 553 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 KCNK16Q96T55 309 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 UBXN6Q9BZV1 441 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 GRID1Q9ULK0 1009 aa18.97■□□□□ 0.63
SHANK3-202ENST00000414786 PLEKHG1Q9ULL1 1385 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms